Protein

View in Explore
Genbank accession
AUS00794.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSDLDNAIKSINESAVKAENTADFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTASESEINQAVATTTQNASEAEQSASEAAQSAGEAATTVETQIRERVGIYKVGNISDYAGQQLQEAEKINSYQYPDNSDDWYGVKDGATFPITIPANPSSDNGWALINALTSYSLSNYTDIVYKASGGNSSVENMIAGVPIAADIDNICKTGGTTFKRVSKSNPSNLSDFIPLTPKLTTDFSSIQEAIDTYIEEVRIPAIQEASQSIDIKFGAKITGAGRDVINDSRNTELTFSGDGIIVGSNANYVNDASISKLRLVGDLTGVGLKLEGEIATPVNESTFKQLRIENFATGLTGLYGYSNVFENIRIQNCTKSFEFQSQSNNTSVTQLNASGGSQTSRFVNAEGMYLESFNWVNQTAPTTISLFQSYVTIDNPYFENLTGNVLIGAASETNASSLSLNGGLIAGDFIIGGNDVSLKVRGSRNAATQSKINSSNGVPDRYCTIDVNTKALSGEDADMNFKDWLLYTNSKENILWAGASGGSIRYSNLYRDYYEFEQQAANNGITIASNLVAGNQYCLVVSMRRDDATAQLSVRHGAFTLAFPDKACPTISSGVGFVTRHLPFVASATDLKLMFTGKVEIKGIAISRGIANSGSVDFDSDEKWRSSAVPFSGQWDRGDYVENSNPSEVGIVGAKYVVAGWRKITSGAGNAINVDWVECRELTGN
Physico‐chemical
properties
protein length:724 AA
molecular weight: 77817,77710 Da
isoelectric point:4,55794
aromaticity:0,08425
hydropathy:-0,30884

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil IPR012334
DC_0090
STR
1–722
DC_0090
AUS00794.1
1 724
Architecture
STR
STR 1-722 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS00794.1
1 724
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9939
Central domain 244 482 240 0,9880
C-terminal 483 724 241 0,9201
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-482
C-terminal
483-724

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.278.O._10N.286.54.E8
[NCBI] 		1881278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS00794.1 [NCBI]
Genbank nucleotide accession
MG592647.1 [NCBI]
CDS location
range 32608 -> 34782
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAAATCAATTAACGAGTCAGCAGTAAAGGCAGAAAATACCGCCGACTTTCTGGATGACATGTCTACGTTTGACGACCAATCAAGCGTAACTAACCCAAACAACGGGCAAACTGTTGCGTCCATTCCGAAGCAAGTAAAAGACCGAACAGATGAGTTATTTACCGCTTCCGAGTCTGAAATAAATCAGGCTGTTGCAACTACAACCCAGAACGCAAGTGAGGCAGAGCAAAGCGCAAGTGAGGCGGCTCAGAGCGCTGGTGAGGCAGCGACTACGGTTGAAACTCAGATCCGGGAGAGGGTTGGGATTTACAAGGTTGGAAATATTTCCGACTATGCAGGACAGCAATTACAAGAAGCGGAAAAAATAAATTCATACCAATACCCTGATAATTCAGATGATTGGTACGGCGTAAAAGACGGTGCGACATTCCCAATTACAATCCCTGCCAACCCATCAAGTGATAATGGGTGGGCTTTGATTAACGCTTTGACCTCTTACTCATTAAGCAATTACACAGACATAGTTTACAAAGCTTCAGGTGGCAACTCATCTGTAGAGAATATGATTGCTGGCGTTCCTATTGCTGCGGATATCGATAATATATGTAAGACTGGCGGAACCACATTCAAAAGGGTATCTAAGTCGAACCCATCGAATTTAAGCGATTTTATCCCGCTAACTCCAAAGCTGACCACCGATTTCTCATCAATACAGGAGGCGATAGACACCTACATTGAGGAAGTGAGAATACCTGCAATTCAGGAGGCGTCACAATCAATAGATATAAAATTCGGAGCTAAAATAACAGGAGCTGGTCGGGATGTAATAAACGACAGTAGAAATACAGAGCTTACATTTTCTGGTGACGGTATTATTGTAGGTTCTAATGCAAATTACGTCAATGACGCATCTATATCAAAACTGCGCTTGGTAGGCGACTTGACAGGTGTAGGCTTAAAGCTTGAGGGTGAGATAGCAACACCAGTCAACGAGAGTACATTTAAGCAGTTAAGAATAGAGAACTTTGCAACTGGGTTAACAGGACTTTACGGTTATTCAAATGTTTTTGAGAACATTAGGATTCAAAACTGCACCAAATCATTTGAATTTCAATCTCAGAGCAATAATACATCGGTAACACAACTAAATGCTTCTGGTGGATCTCAGACATCTAGATTTGTGAATGCTGAAGGTATGTATCTAGAGTCTTTTAACTGGGTAAACCAAACAGCACCAACAACAATTAGCCTATTTCAAAGTTACGTCACAATAGATAACCCTTACTTTGAAAATCTAACCGGAAACGTGCTTATAGGAGCGGCATCAGAGACTAACGCATCATCCCTTTCATTAAATGGCGGTCTTATAGCTGGGGACTTTATCATAGGTGGTAATGACGTATCTTTAAAGGTAAGAGGAAGCAGAAACGCAGCGACTCAAAGTAAAATAAACTCATCAAACGGAGTTCCTGATAGATACTGCACGATTGACGTTAACACCAAAGCGCTATCTGGTGAAGATGCAGATATGAACTTTAAAGACTGGCTATTGTACACCAACTCTAAGGAAAACATACTGTGGGCAGGTGCATCTGGCGGAAGCATTAGATACAGCAATCTATATAGAGATTACTATGAGTTCGAACAGCAAGCTGCAAATAACGGCATAACCATAGCTTCGAATCTTGTTGCAGGAAATCAATATTGCCTTGTTGTAAGCATGAGAAGGGATGATGCTACCGCGCAACTATCAGTTAGGCACGGAGCGTTTACCTTGGCATTTCCTGACAAGGCATGCCCGACAATATCATCAGGCGTTGGATTTGTAACCAGGCACCTTCCTTTTGTTGCTTCAGCCACCGACCTGAAACTTATGTTTACTGGAAAGGTTGAAATAAAAGGAATCGCAATATCGAGAGGAATAGCTAACTCTGGGAGTGTTGACTTTGATTCGGATGAAAAATGGAGAAGCTCAGCTGTTCCTTTTAGTGGGCAGTGGGATAGGGGTGACTACGTTGAAAATTCAAACCCATCAGAGGTAGGGATAGTAGGTGCAAAGTACGTTGTTGCAGGGTGGAGAAAAATAACATCAGGGGCAGGGAATGCAATAAACGTCGATTGGGTTGAGTGTAGAGAGCTTACAGGAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b30cf6109956efd30f5102051f1d74ac383cdd418a353fd199674ffd99985083
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7022
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank