Protein

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Genbank accession
YP_004957867.1 [GenBank]
Protein name
haemolysin-type calcium binding
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVIYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAILVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINTKNELLTHTDGKYRWDGTLPKTVAAGSTPATTGGVGSGAWLSVGDASLKSNLNKPNGLSYIGTVSSVSELSSIAGLIGDSIILDSYVDGFNLGGGVMVAVNSDTVVDNIVTFQGNGVVWKRKLFNGVADVYEAGYTGTGDLAIFINKINAVGFDCIVPVSGEITTPIIFDIAKGALIGKNKCTLIESASATGDYYLTIVNTDTDYTNRDVINATALMTGVSFVGKGTRKLAIGGSTSGEVSELRISNCGFISTAGIEFLDNAYRILFDKCALSRSFTNSVIFNSPANSGEVIKFNHCWMVDNGGPFTFKNGQFIFDSCSLPAGKKSGYFDPVVALSDNATTVFTNGNIEYQPGQSFVGFTVDGSSRLSISDSTILLPNDYSTVPIVNNGDGVVSLNNCSLPLYGSTTIATGFATRQLIGGLSKKIMSRGCYPRAGFITSNWNLGCIVSPYINSVSNGSGQFENISNWTLSQTGTDVVTVTTGNDVPNDLMFSTSFVLSVPTVGAAANFTQTIIDCEPGRYFQLGFWAKNTTTTLASIRFLDQQGNAVADSIGYNIPVGNTFNFYALVDCVPPGAYKAEINFNVSSIVGGIAIHNVIYGLI
Physico‐chemical
properties
protein length:1036 AA
molecular weight: 109606,23730 Da
isoelectric point:4,52429
aromaticity:0,09459
hydropathy:0,05077

Domains

Domains [InterPro]
DC_1946
ATT
1–1018
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 G3DSA:2.60.120.260
IPR040775
RBD
416–481
IPR040775
YP_004957867.1
1 1036
Architecture
ATT
STR
ATT 1-1018 | STR 1019-1029 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004957867.1
1 1036
Domain Start End Length (AA) Confidence
N-terminal 1 577 577 0,9987
Central domain 578 886 310 0,9938
C-terminal 887 1036 149 0,9844
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-577
Central
578-886
C-terminal
887-1036

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Cba120
[NCBI] 		2886902 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004957867.1 [NCBI]
Genbank nucleotide accession
NC_016570 [NCBI]
CDS location
range 126134 -> 129244
strand -
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTGCGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGTGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGATATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATTACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTCACTCTCAATACTCCACCAACAATTGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCATTAGATGGGAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACTGAATTGCAGGTAATAGAATATACTCCTATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGCGTAACCAATGTTAAAGATACAGAGGTCATTTATTTTAGTGTTGGTGCTGTGTTAAGCGGGTATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTATACTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATATGTTACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATACTAAAAATGAATTACTCACCCATACTGATGGAAAGTATCGTTGGGATGGTACACTTCCTAAAACTGTAGCTGCTGGCTCAACTCCAGCAACAACTGGAGGTGTTGGTTCGGGAGCGTGGTTGAGTGTTGGTGATGCATCTCTGAAAAGTAATTTAAATAAACCAAATGGCTTATCTTATATAGGAACCGTATCATCAGTTTCTGAATTATCATCAATAGCAGGATTAATTGGTGATTCTATAATTCTTGATTCGTATGTTGACGGGTTTAATCTTGGTGGCGGTGTTATGGTGGCTGTTAACTCAGATACTGTGGTGGATAATATCGTTACTTTCCAAGGCAATGGTGTCGTTTGGAAAAGGAAATTATTCAACGGTGTGGCGGATGTGTACGAAGCTGGTTATACTGGAACCGGAGATTTGGCTATATTCATCAATAAAATAAATGCCGTCGGATTTGACTGTATAGTCCCTGTTTCTGGTGAGATAACAACACCGATTATTTTTGATATAGCAAAAGGTGCACTTATTGGAAAAAATAAATGTACTCTAATAGAATCTGCATCTGCAACGGGCGACTACTATCTAACCATCGTTAATACAGACACGGATTACACCAATAGAGATGTAATTAACGCAACTGCGTTAATGACTGGAGTGTCATTTGTTGGAAAAGGGACCAGGAAATTGGCGATCGGTGGTTCTACCAGTGGAGAAGTCTCAGAGTTAAGAATATCTAATTGCGGGTTTATCTCAACTGCTGGAATTGAGTTTCTTGATAATGCATATCGTATTCTTTTTGATAAATGTGCGTTGTCCAGAAGTTTTACAAATTCTGTTATTTTCAATTCACCAGCGAATTCCGGTGAAGTTATAAAATTTAATCATTGTTGGATGGTTGACAACGGTGGACCTTTTACATTCAAGAATGGACAATTTATATTCGATAGCTGCTCTCTACCAGCAGGTAAAAAATCAGGATATTTTGACCCTGTTGTTGCGTTATCAGATAACGCAACAACAGTTTTCACAAATGGCAACATTGAGTACCAACCTGGTCAGAGTTTCGTTGGGTTTACTGTAGATGGTAGTTCACGATTAAGCATCAGTGATTCGACAATACTGTTGCCGAATGATTATTCTACAGTACCTATTGTAAACAACGGGGATGGGGTTGTTAGTCTAAATAATTGCTCGTTACCTCTCTATGGAAGCACAACGATTGCTACTGGGTTTGCCACACGGCAGTTGATAGGTGGGTTGAGTAAAAAAATAATGTCCAGAGGTTGCTATCCACGAGCAGGGTTTATAACAAGTAACTGGAATTTAGGGTGCATTGTAAGCCCTTATATTAATAGTGTTAGTAATGGCTCAGGGCAGTTTGAAAATATATCTAACTGGACACTCTCACAAACTGGAACAGACGTTGTCACTGTTACTACAGGAAACGATGTTCCTAACGATTTAATGTTTTCAACTTCTTTTGTCTTATCCGTACCAACAGTGGGTGCAGCGGCTAATTTCACCCAGACAATCATTGACTGTGAGCCTGGGCGTTATTTTCAACTTGGGTTTTGGGCTAAAAATACAACAACCACCCTGGCATCAATTAGATTCCTGGACCAGCAAGGAAATGCTGTCGCGGATTCCATAGGATATAACATCCCAGTAGGAAACACGTTCAACTTTTATGCTTTGGTGGATTGCGTTCCGCCAGGAGCTTACAAAGCTGAAATTAATTTCAATGTTTCCTCTATTGTTGGTGGTATCGCAATACACAATGTCATTTACGGATTGATATGA

Genome Context

Genome Context

Tertiary structure

1 / 5
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Genome of vB_EcoM_CBA120 Kutter,E.M., Blasdel,B.G., Kropinski,A. and Brabban,A.D. 1980-09 — GenBank