Phage RBP Database

Genbank accession

AOO09383.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Protein sequence

MAQNTNLNVTPYYDDFDKDKNFYRVLFRPGFPIQARELTTMQSILQNQVENVGSHLFKDGAMVIPGQVGYDLNVAAIMLQESFLGADVEEYRTQLNGKIIEGLTTGVKAKVLYSISSTESDKGYITLYVKYIESGGVNANQETFQNNEQLITDVEITFGTTLIEVGSPFAQLLPTAALQVGSVAYVQSGVYFIRGFFVDVDYQYILLDQYGSNPSYRIGLDIQESIVTPEDDLSLNDNAAGTSNYAAPGAHRFRITTRLIKKLLTDDADKNFIELLRINASKVEKLVDRSAYEELEKGLALRTYEESGNYVVRDFAIKVRENLDDGFNNGVFAKGSTTSSGNTADEAKYAVEFGAGIAYVKGYRVSRLAPSFVDLEKPRATKDAQNVVIPFEMGNFSNVQNVFGFPNITGSTLSNAYQTIELRDTFSASQGSAAGNLIGFARVTSLQHVSDPDTTFGNADDRYKMNIMDVQMFGVLELTSAQTVSAGSLVVGASSGARAYLVNAISNSVRFDVYQIEGNFIENEMLTVDGENLDTIDSLHIYQYSDTRQVVARDETTSAIEFTADIVLEDAQIIEGSTFTYDATGGSEDITGLQSNFALDLRPGDEIYFNSTDFVVVDKIDPADVANTDIGNIFDYSNQVVNVTPGSSAPSAGTYTTLVRYRSKLFDIQNADLLSEMPKKYIKSIADESMVVRRTFDSQTVASNSVSITLPENEQFQSISNENYTITVLAGTNGTHPVGDQITIDTATPANLGYTSFTSADRTTIQIDNLTNITSVKVTATISKNVTIRKTKSGNQMFILKVNKTDKNLDKQNYNLVYSNLYGTRIQDKELSLGLTDCYRMHAVYESNDDNDPVIPSVTLVEPTFFATGSIVTGRTSKARAKVVDFASGSLKLSLVYLSGQFVAGETLDGFDSNDDALTAIINDSEGSVVAGSKVVTDNYFLEVNQTGFIYNISKLVRKKGVAAPIRKLKIVLDYYTHSATGDYFGGQSYLDTTYSDIPFFGFKFLADYLDFRPGVKNLYSGTGTVASPAFVNCSTFDFKSRVFNVSGTPNATVFDVPKLESNFRCDFNWYLPRVDKVFVTPEGEFQVIKGKSEEAPQPPDEIAEGMLLATISHKPYGFDPEKDTVITRSDNKRYTMRDIGALERRLDQVEYYTSLNILESNTYNTQILDSSGKNRLKNGFIVDDFSDHGKSDTAHEDFAASLDFQYGECQASHYTTNIPLVINTSLSTNYQQTGPLITLPYTEKKLIEQPYASRVENINPFNVFTYIGRVTLTPGSDDWLDTSRIPAQVTQIEGDFEQTSSELNVDQNGFAPIQWRAWETNWTGERVIGSSIQRNSHWLAQDRGRSPNPGVWGGRGMRRINRVTTIEATGTATREGIRTRVIPRIDRQSLGDSVVSSVSIPWIRSRNIEVDVARLKPRTRFYSFFDGKQTIDYQIPKMIELIKDPAIDNRTNSTPFSIGETVTGLTSGCKFKVAAPNDFYRFNPYDDTELPTSYASTTAYLNIDTTELAKQAVGDFYGNFQVQEVLEGTSGARAVIKDRRLISDRFGKLKTSFFIPSPGVDTNPRWATGTRTLRLSTDENDSRLAGAVASAAETNYEASGTLNTVQENVLAVRNAEIVRDTVTQDRTVRSTRTEIRQVGWYDPLAQSFIVDENGGAFITSVDVYFFKKDTNIPVSMQIRTMENGYPTTTILPFSDVSIEPDDVQLSETAAVATRFTFDAPVFIPQSVEHCFVLLSDSNSYQIWISRMGDQDITGDRTISEQPYAGVLFKSQNASTWTADQYEDLKFVVNRAEFSNTVNSALVLNNTVLARGNGGELNLRRDGIQTFTPELVLNLNSTTLPYTVGARIYQKTTNAEGTISKREVTVAGVLLTINDISGNWQQGSVNNNIVTNGIVSSKTTATITVTSASRTGATYSAGDTVTGATSGATAEVVSDDGGDTGTIVFRYVSKAFTAGETLEGDGTAGNVAFSAVTYAGDAVEAATISNAFPDATPTYASTQRKVKVFHSNHCMHSTANNVKIEGAVSEVADTSLTASISASDTSVSVSDAAAFHKTINGALISSNNVGYIKIGNEIMSYSAISNDNKTITINERGLDGTTAVSHADESVVECYNLDGIPLIEINKTHIGIQNPTLDSYELTTSSIARLGILGGGTNMYATQNVQYNLLVPQVERMLLPKTDITARINTISGTSINDGQTLSQASFSNDGVFNDVILGTDNYLDSPQLICSNINESNELSGAKSFRMDLTLSSLEANVSPVIDTDRLSATLVSSRINNPSDPNTAKLAVGDSHDAVYISRIADLTNPSGSIKVYFEGYRPPNSQIKVLYRVRPVGTATPIEELGFDFFPTEDAKIPATTERQLFREYEYEVSGLNFDQYQIKVVFVSPNQAYSPIIKDIRAIALAV

Physico‐chemical properties

protein length:	2403 AA
molecular weight:	263531,05200 Da
isoelectric point:	4,76950
aromaticity:	0,09280
hydropathy:	-0,26288

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032096	STR	DC_0487	12	68	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0414	STR	DC_0414	80	1295	Novel HMM	DC_0414	Central	Low	Positional only	88 proteins / 88 hits
IPR032096	STR	DC_0487	183	392	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
IPR032096	STR	DC_0487	1040	1286	InterPro cluster	Domain of unknown function DUF4815	Central	Low	Positional only	116 proteins / 218 hits
DC_0082	RBD	DC_0082	1284	2403	Novel HMM	DC_0082	C-terminal	Low	Positional only	104 proteins / 104 hits

	Name	Taxonomy ID	Lineage
Phage	Synechococcus phage S-RIM2 [NCBI]	687800	Uroviricota > Caudoviricetes > Pantevenvirales > Nerrivikvirus > Nerrivikvirus srim2
Host	Synechococcus [NCBI]	1129	cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Genbank protein accession

AOO09383.1 [NCBI]

Genbank nucleotide accession

KX349281.1 [NCBI]

CDS location

range 82245 -> 89456
strand +

CDS

ATGGCACAAAACACAAACCTTAACGTCACACCTTATTACGACGACTTCGATAAGGACAAGAATTTTTATCGAGTGCTGTTCCGCCCTGGATTTCCTATTCAGGCAAGGGAACTTACTACGATGCAGAGTATTCTGCAGAATCAGGTAGAAAACGTCGGTTCTCACTTGTTCAAAGATGGCGCAATGGTCATCCCTGGTCAAGTTGGTTATGACCTGAACGTTGCTGCTATCATGCTTCAGGAGTCGTTCCTTGGTGCTGATGTTGAGGAATATAGAACTCAGTTGAATGGTAAGATTATTGAAGGTCTTACAACAGGTGTTAAGGCAAAAGTTCTTTATAGTATTTCTTCTACCGAGTCTGATAAAGGTTACATCACACTTTACGTTAAGTACATTGAATCTGGTGGTGTCAATGCTAATCAGGAGACTTTCCAGAACAACGAACAGTTGATTACCGACGTCGAGATTACGTTCGGTACAACTTTGATTGAGGTTGGTTCTCCCTTTGCTCAGTTACTTCCTACCGCTGCTCTACAAGTCGGTTCTGTTGCATATGTTCAGAGTGGTGTCTACTTCATTCGCGGTTTCTTTGTTGATGTAGATTATCAATACATCCTTCTCGACCAGTATGGAAGCAACCCCTCCTATCGTATCGGTCTCGATATTCAAGAGTCTATTGTCACACCAGAAGATGACCTTAGTCTCAACGATAACGCTGCTGGAACATCTAACTATGCTGCACCTGGTGCTCATAGATTTAGAATCACCACGAGACTGATCAAAAAACTTCTGACTGATGATGCTGATAAGAACTTCATCGAACTGCTTCGTATTAATGCTTCTAAGGTAGAGAAACTTGTTGATAGAAGTGCATATGAAGAACTTGAGAAGGGTCTTGCATTAAGAACATATGAAGAGTCTGGCAACTACGTTGTTAGAGATTTTGCAATCAAAGTTAGAGAAAATCTTGATGATGGTTTTAACAATGGTGTGTTTGCAAAAGGTTCGACTACATCCTCTGGCAATACTGCCGATGAAGCAAAGTATGCTGTAGAGTTTGGTGCTGGTATTGCATACGTCAAGGGTTATAGAGTTAGTAGACTTGCTCCTTCTTTTGTTGATCTTGAAAAACCTCGTGCTACAAAAGATGCACAGAACGTCGTTATCCCATTTGAAATGGGTAACTTCTCCAATGTCCAGAATGTTTTTGGATTCCCCAATATTACTGGTTCTACTCTGAGTAATGCATATCAGACAATCGAACTGCGTGACACTTTTTCTGCTTCTCAGGGTAGTGCCGCTGGTAACCTGATTGGTTTTGCTCGTGTCACATCACTGCAGCATGTGAGTGATCCAGATACGACCTTTGGTAACGCTGACGACAGATATAAGATGAACATCATGGATGTTCAGATGTTTGGTGTCTTGGAACTTACAAGTGCTCAAACTGTATCTGCAGGTTCTTTGGTTGTTGGTGCATCTTCTGGTGCAAGAGCATATCTTGTAAATGCTATCTCAAACTCTGTTAGATTTGATGTATATCAAATTGAAGGTAACTTCATTGAGAATGAAATGCTTACCGTTGATGGTGAGAATCTGGATACTATTGATTCTCTGCATATCTATCAGTATTCTGATACTCGTCAGGTTGTTGCTAGAGATGAGACAACTTCTGCAATCGAGTTCACTGCTGACATCGTTCTGGAAGACGCTCAGATCATTGAAGGTAGTACGTTTACATATGATGCAACAGGCGGTTCTGAAGATATTACAGGTCTTCAATCTAACTTCGCTTTGGATCTCAGACCTGGAGACGAGATCTATTTCAACAGTACCGATTTTGTTGTTGTAGATAAGATCGATCCTGCTGATGTTGCTAATACTGATATTGGCAATATCTTTGATTATTCTAACCAAGTTGTTAATGTAACTCCTGGTTCTTCTGCTCCTAGTGCAGGAACTTATACCACTCTTGTTCGTTACAGATCAAAACTGTTTGATATTCAGAATGCTGATCTCTTGAGTGAAATGCCCAAGAAGTATATCAAGAGCATTGCTGACGAATCAATGGTTGTCAGAAGAACATTTGATTCTCAGACTGTTGCATCAAACTCTGTTTCCATTACTCTGCCTGAGAATGAGCAGTTCCAGTCAATCTCTAACGAGAACTACACAATCACTGTTCTTGCTGGTACTAATGGTACTCACCCTGTCGGTGACCAAATCACTATTGATACTGCTACACCTGCTAATCTTGGTTATACTTCATTCACATCTGCTGATAGAACGACGATTCAGATTGATAACCTGACAAATATCACTTCTGTTAAAGTTACTGCAACTATTTCTAAGAACGTAACTATCAGAAAAACTAAGTCTGGCAACCAGATGTTTATTCTTAAGGTCAACAAGACCGATAAGAATCTTGATAAGCAGAACTATAACTTGGTATATTCCAATCTTTATGGTACAAGGATTCAAGACAAAGAACTGTCTCTGGGTCTGACTGATTGTTATCGTATGCACGCTGTGTATGAATCTAACGATGATAATGATCCTGTAATCCCTTCTGTGACTCTGGTTGAACCAACTTTCTTTGCTACAGGTAGCATCGTAACTGGTAGAACCTCAAAAGCAAGAGCAAAAGTTGTTGACTTTGCTTCTGGTTCCTTGAAACTGAGTTTGGTATATCTCAGTGGTCAGTTTGTTGCTGGTGAAACTCTCGACGGTTTCGATAGCAATGATGATGCACTCACTGCTATTATCAACGATAGTGAAGGTTCGGTTGTTGCAGGTTCTAAGGTTGTTACTGACAACTACTTCTTGGAAGTAAATCAGACAGGATTTATCTACAATATTTCTAAACTTGTTCGTAAGAAAGGTGTTGCTGCACCTATTAGAAAACTGAAAATTGTTCTTGACTACTACACTCACTCTGCAACAGGTGATTATTTTGGTGGTCAATCCTATCTGGACACTACTTATAGTGACATTCCTTTCTTTGGATTCAAGTTCCTTGCAGATTATCTCGATTTCCGTCCTGGTGTCAAGAACCTCTATAGTGGAACTGGTACTGTAGCATCTCCTGCATTCGTCAACTGTTCTACATTTGATTTTAAATCTAGAGTATTCAACGTATCTGGCACACCTAACGCAACAGTCTTTGATGTTCCTAAGTTGGAAAGCAACTTCCGTTGTGATTTCAACTGGTATCTGCCTAGAGTTGACAAAGTATTTGTTACTCCCGAGGGAGAGTTCCAAGTTATCAAAGGTAAGTCTGAGGAAGCACCTCAACCACCTGATGAAATCGCAGAAGGTATGCTTCTGGCAACCATCAGTCATAAACCATATGGTTTTGACCCAGAAAAGGATACGGTCATCACTCGCTCCGATAATAAGCGTTACACGATGCGTGACATTGGTGCGTTAGAGCGTCGTCTTGACCAAGTTGAGTATTATACCTCCTTGAATATCCTGGAGTCCAATACCTATAATACTCAGATTCTTGATTCTAGTGGTAAGAACAGACTGAAAAATGGTTTTATCGTTGATGATTTCTCCGATCACGGTAAGTCTGATACTGCACATGAAGACTTTGCAGCATCTCTTGATTTCCAATATGGTGAGTGTCAAGCATCTCACTATACAACTAACATTCCTCTTGTTATCAATACAAGTCTTTCTACTAACTATCAGCAAACAGGTCCTCTGATTACTCTTCCTTATACAGAGAAGAAACTGATTGAGCAACCTTATGCTTCTAGAGTTGAAAATATCAACCCCTTCAACGTCTTTACCTATATTGGTCGTGTAACACTGACTCCTGGTTCTGATGATTGGTTGGATACAAGTAGAATCCCTGCACAGGTCACACAGATTGAAGGTGACTTTGAGCAGACTTCTTCTGAACTTAATGTTGACCAGAATGGTTTTGCTCCTATTCAATGGAGAGCATGGGAAACTAACTGGACTGGTGAAAGAGTCATTGGTTCTAGTATCCAACGTAACTCTCACTGGTTAGCACAAGACCGTGGCAGATCTCCCAACCCTGGCGTCTGGGGTGGTCGTGGTATGCGTCGTATTAATAGAGTTACTACTATTGAAGCGACTGGAACTGCAACCAGAGAAGGCATTAGAACTCGTGTTATTCCCAGAATCGACCGTCAGTCTCTGGGCGATAGTGTTGTTTCTAGTGTTAGTATTCCTTGGATTCGTTCTAGAAATATTGAAGTTGATGTTGCACGTCTGAAGCCTAGAACTCGTTTCTACTCTTTCTTTGACGGTAAGCAGACCATTGATTATCAGATTCCTAAGATGATTGAACTCATCAAAGATCCTGCGATTGATAATAGAACAAACTCAACACCTTTCTCTATTGGTGAAACTGTAACAGGTTTGACTAGTGGATGTAAATTTAAAGTTGCTGCTCCTAATGACTTCTACAGATTCAACCCATATGATGATACAGAACTTCCTACATCGTATGCATCTACCACAGCATATCTGAATATTGATACTACTGAACTTGCTAAGCAGGCAGTCGGTGATTTCTATGGTAACTTCCAAGTACAGGAAGTTCTGGAAGGCACATCTGGTGCTCGTGCTGTTATTAAGGACCGTCGTCTTATCTCTGACCGCTTCGGTAAACTGAAGACTTCATTCTTCATTCCTTCTCCTGGAGTTGATACCAATCCCCGTTGGGCAACTGGTACAAGAACTCTGAGACTGTCTACCGATGAGAATGATTCACGTCTGGCAGGTGCAGTTGCATCCGCTGCTGAAACAAACTACGAAGCAAGTGGTACTCTGAATACTGTTCAGGAAAATGTCTTGGCAGTTCGTAATGCTGAAATCGTTCGCGATACTGTTACTCAAGATCGAACAGTTCGTTCTACTAGAACTGAGATTCGTCAGGTTGGTTGGTATGACCCTCTGGCACAATCCTTTATTGTTGATGAAAACGGTGGTGCATTTATCACCTCTGTCGATGTTTACTTCTTCAAGAAAGATACAAACATCCCCGTTTCCATGCAAATCAGAACCATGGAGAATGGTTATCCCACAACAACCATCCTTCCTTTCTCTGATGTAAGTATTGAACCTGATGATGTTCAGTTGTCTGAGACTGCTGCAGTTGCTACTAGATTTACATTTGATGCTCCTGTCTTCATTCCTCAGTCTGTTGAGCACTGCTTCGTTCTCCTCTCTGACTCCAACTCTTATCAGATTTGGATCTCTAGAATGGGTGACCAGGATATTACTGGTGACAGAACAATCTCTGAACAACCTTATGCTGGTGTTCTGTTTAAGTCACAAAACGCATCTACATGGACTGCTGACCAGTACGAAGACCTTAAGTTTGTTGTAAACAGAGCAGAATTTAGTAATACTGTTAACTCTGCATTGGTTTTGAACAACACTGTTCTTGCAAGAGGTAATGGTGGTGAACTAAACCTCCGTAGAGATGGTATTCAGACATTCACACCTGAACTGGTTTTGAACCTGAACTCCACAACTCTTCCCTATACCGTTGGCGCTCGTATCTATCAGAAGACTACTAACGCAGAAGGTACTATCTCTAAGAGAGAAGTAACTGTTGCTGGTGTTCTTCTGACAATCAACGATATTTCTGGTAACTGGCAGCAAGGTAGTGTGAATAATAATATCGTTACTAACGGTATTGTTTCTTCCAAGACTACTGCAACTATTACAGTCACTTCTGCTTCTAGAACTGGTGCTACCTATAGTGCAGGTGATACTGTTACTGGCGCTACATCTGGCGCAACTGCTGAAGTTGTAAGCGATGATGGTGGTGATACTGGTACAATCGTATTCCGTTATGTTTCTAAGGCATTTACTGCTGGTGAAACTCTGGAAGGAGATGGAACTGCTGGTAACGTCGCATTCTCTGCTGTTACCTATGCTGGTGACGCTGTTGAAGCTGCAACAATCAGCAATGCATTCCCTGATGCAACGCCTACCTATGCATCTACTCAGAGGAAGGTTAAGGTCTTCCACAGTAATCACTGTATGCATAGCACTGCCAACAACGTTAAGATTGAAGGTGCAGTCTCCGAAGTTGCAGATACCTCTCTGACGGCATCTATTTCTGCTTCAGATACATCTGTTTCTGTCAGTGATGCTGCAGCGTTCCACAAGACAATCAATGGTGCATTAATCTCTTCCAACAATGTTGGTTATATCAAGATTGGTAATGAGATTATGTCTTATTCTGCTATCAGTAATGATAATAAGACAATCACAATCAATGAAAGAGGTCTTGACGGTACAACTGCAGTATCTCACGCAGACGAGTCTGTTGTTGAGTGCTACAACCTTGACGGCATTCCTCTGATTGAGATTAACAAGACTCATATTGGAATCCAGAATCCAACTCTCGATTCTTATGAACTGACTACCTCTTCTATTGCTAGACTTGGTATCCTGGGTGGTGGCACTAACATGTATGCAACTCAAAATGTTCAGTACAACTTGCTTGTTCCTCAGGTTGAGAGAATGCTTCTTCCCAAGACCGATATTACGGCAAGAATTAATACCATCTCTGGTACATCTATCAATGATGGACAAACCTTATCTCAGGCATCGTTCTCGAATGATGGTGTATTTAATGATGTCATCCTCGGAACCGACAACTATCTTGACTCTCCTCAACTGATTTGTTCTAACATCAACGAGTCTAACGAACTCAGTGGTGCTAAGTCCTTCAGAATGGACTTGACCTTATCAAGTCTTGAAGCAAACGTTTCTCCTGTTATTGATACTGATAGACTGTCGGCAACTCTTGTTTCTAGTAGGATTAACAATCCTTCCGATCCCAATACTGCTAAACTTGCAGTTGGTGATTCTCACGATGCGGTATACATTAGTCGTATTGCAGATCTGACCAATCCTTCTGGTTCTATCAAGGTCTACTTTGAGGGATACCGTCCTCCTAATAGTCAGATTAAGGTCCTATATAGAGTACGTCCCGTTGGTACGGCAACACCTATTGAAGAACTCGGATTCGATTTCTTCCCAACCGAAGATGCTAAGATTCCTGCTACAACGGAAAGACAACTGTTCCGTGAGTATGAGTACGAAGTATCTGGTCTAAACTTTGACCAGTATCAAATCAAGGTTGTATTTGTTTCTCCCAACCAGGCGTACAGTCCAATCATCAAAGATATCAGAGCAATCGCCCTTGCTGTATAA

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence