Protein

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Genbank accession
XYS96201.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADLKAGSTVGGLPIWHQGTMPLVPVGNSLTYRGYTVYTTNDKPKAVDNDFVSKANGGTGSQGFQKEVEFKEGIKISATFSGGNSLNGLYSGNGDSASLTTANIDIVSWYGVGIRTSLDNKERTVVWNARTGDQINKGSITASILSSNNAPTAAQHLTRKDYVDGRINTVTTNANSRVLKSGDTMTGVLRAEAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
Physico‐chemical
properties
protein length:225 AA
molecular weight: 23789,18820 Da
isoelectric point:9,04570
aromaticity:0,07111
hydropathy:-0,30800

Domains

Domains [InterPro]
DC_0466
STR
1–221
DC_0466
IPR005601
STR
74–187
IPR005601
XYS96201.1
1 225
Architecture
STR
STR 1-221 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS96201.1
1 225
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,3805
Central domain 164 214 52 0,0406
C-terminal 215 225 10 0,9351
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-214
C-terminal
215-225

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage HMGUkp2
[NCBI] 		3434165 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96201.1 [NCBI]
Genbank nucleotide accession
PV683292 [NCBI]
CDS location
range 82517 -> 83194
strand -
CDS
ATGGCTGATTTAAAAGCAGGTTCTACAGTCGGAGGTTTACCAATTTGGCATCAAGGTACTATGCCATTGGTCCCAGTTGGAAACTCTTTGACTTATCGTGGTTATACGGTTTACACGACTAATGATAAACCTAAAGCAGTGGATAACGACTTCGTGTCAAAAGCTAACGGTGGCACAGGTTCTCAAGGTTTCCAAAAAGAAGTAGAATTTAAAGAAGGTATTAAGATTTCTGCTACTTTTAGTGGCGGTAATAGTTTAAACGGGCTTTATTCTGGTAATGGAGACTCGGCATCTCTAACAACAGCGAACATTGACATTGTTTCATGGTACGGCGTCGGTATTCGTACTTCACTAGATAATAAAGAACGGACAGTAGTTTGGAACGCTAGAACTGGGGATCAAATAAACAAAGGAAGTATAACAGCTTCTATTCTTAGTTCTAATAATGCTCCTACAGCCGCTCAGCATTTAACTCGTAAAGATTATGTTGATGGGCGAATAAATACTGTTACTACTAATGCAAACAGCCGGGTTTTGAAATCTGGTGATACTATGACTGGTGTACTTAGAGCTGAAGCCGGTGTAGTTATAGTAAATAAAGCGACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCGCGCGGAGTAACAATAGATTTTGGCACATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36854f3c9f1c1740abd87f0cdf870f5a242210334d851c57101216fd31f24b4e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8200
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50