Protein

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Genbank accession
CBJ93822.1 [GenBank]
Protein name
hypothetical phage protein
RBP type
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MNVRLRIINNQQVPELPSFTDSKEDNLTTDVKLDVLTHQEVDRNFANIITWLKTVSDKIVEQSTVLKQLDPENMEKLLKAAEQIQTISDDIKSLETKYNQVNNDLTNYKTSNDLALSRKLDSVKTINGIDITGSGNADINITRTQFTNHLTNIGINEIGSIAILDSKTTLVFNNLYAGSSLSTDTYAYMQGTWKCTGKLSDNKGLFIRVS
Physico‐chemical
properties
protein length:210 AA
molecular weight: 23505,17690 Da
isoelectric point:5,23660
aromaticity:0,05714
hydropathy:-0,40762

Domains

Domains [InterPro]
DC_0975
STR
1–210
DC_0975
Coil
Unmapped
77–111
Coil
CBJ93822.1
1 210
Architecture
STR
STR 1-210
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP220
[NCBI] 		2994044 Uroviricota > Caudoviricetes > Connertonviridae > Firehammervirus CP220 >
Host Campylobacter sp.
[NCBI] 		205 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBJ93822.1 [NCBI]
Genbank nucleotide accession
FN667788 [NCBI]
CDS location
range 10445 -> 11077
strand +
CDS
GTGAACGTAAGATTACGTATTATTAATAATCAGCAAGTACCAGAATTACCAAGTTTCACAGATTCTAAAGAAGACAACTTAACTACAGATGTTAAATTAGATGTCTTAACACACCAAGAAGTAGATAGAAACTTTGCTAATATTATTACGTGGTTAAAAACTGTTAGTGATAAAATAGTCGAACAATCAACAGTTCTAAAACAATTAGATCCTGAAAATATGGAGAAACTTTTAAAAGCTGCTGAACAAATACAAACAATTTCTGATGATATCAAAAGCTTAGAAACTAAGTATAACCAAGTTAATAATGATTTAACAAATTACAAAACTTCAAATGATTTGGCTTTATCTAGGAAATTAGATTCAGTAAAAACTATAAATGGTATAGATATTACAGGTTCTGGAAACGCTGATATTAATATAACAAGAACGCAATTTACAAATCACTTAACTAATATTGGTATTAATGAAATTGGCAGCATAGCTATATTAGATTCTAAAACAACTTTGGTTTTTAATAATTTATATGCGGGTTCTAGCTTGTCCACGGATACTTATGCATATATGCAAGGTACTTGGAAATGTACTGGTAAATTAAGTGATAATAAAGGCTTATTCATCAGAGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5645519886b2550209c8fb8b1b1024455ac34b14b125fb47d8048e9241fe9396
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7523
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Evidence for a lineage of virulent bacteriophages that target Campylobacter Timms,A.R., Cambray-Young,J., Scott,A.E., Petty,N.K., Connerton,P.L., Clarke,L., Seeger,K., Quail,M., Cummings,N., Maskell,D.J., Thomson,N.R. and Connerton,I.F. 2010 20353581 GenBank