Protein

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Genbank accession
XYA28896.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKTQFNQPQGSTSRETNKEAIARIFGLKKSQVGYLSTTTPIDSYVILFDKETQTCWYRGTATGTPINWVVSGNSISLTTENGIFSLKLLDIFKNLKSTEPGMGVDLIGGSRKYFKVTDYPGGTPDSKVSRNGNGTLTIIKGTNNTSAIKAALIDAQTYNGIVYFPSPENGNAYLYDDTLYPAVTSGALWRGASILGDGKTATKLIFDGGDKPAIHVKGTSGWPTNIFLHGISLYSANDFVGEGWKLQGITGIRLSDFAAYRFGDGGLSFSNGSAAGIFTEFNIIEDGWLENNKTNTKFRKDGGDGSFHGITMRNVISNNLTGQTGLDIGTGCVIYNADWNQVTFFGASGVQWILNNGSRNGFETLYFEGDGTVTNNGSWSTAGYWRVQNSTGAIVDTSTIPFFNEGYITPTSPTDANFSAAGFTSLESLKPLISNQAYRGLMRLRGNNAEAIAVTGYDSGTFENQGLAIVSQSLGDGIKDVILRQLLHLNGITSFRPEYRFNYIGGSTQLSINSNGRHTGVMGKRVVGSITANAAAQTISLSGLLPVNDQAYDVVLVVSTPGVTSKITGVFTGMYDTTTNTTLKPVDNTRTAGTELSISASSGVKITSGGLVSITLTATVDCTYSLVVIGKGAY
Physico‐chemical
properties
protein length:634 AA
molecular weight: 67588,73860 Da
isoelectric point:6,96837
aromaticity:0,09937
hydropathy:-0,14669

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50
XYA28896.1
1 634
Architecture
ATT
ATT 1-93 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA28896.1
1 634
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9825
Central domain 143 406 265 0,9822
C-terminal 407 634 227 0,9629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-406
C-terminal
407-634

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM-Zahir
[NCBI] 		3447921 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA28896.1 [NCBI]
Genbank nucleotide accession
PV891800.1 [NCBI]
CDS location
range 20051 -> 21955
strand +
CDS
ATGAAAACGCAGTTCAACCAACCCCAAGGCTCGACTTCACGTGAAACCAACAAAGAAGCAATTGCTCGCATCTTTGGATTGAAGAAGTCTCAAGTCGGATATCTGTCAACAACTACTCCAATTGATTCTTATGTCATACTGTTTGACAAAGAAACTCAGACTTGTTGGTATCGAGGTACGGCCACTGGCACACCGATAAATTGGGTTGTTTCCGGGAATTCGATTAGTTTAACTACTGAAAATGGAATTTTTTCTTTAAAATTGCTGGATATTTTTAAAAATTTAAAATCCACTGAACCAGGTATGGGTGTTGATTTGATTGGGGGTTCCCGTAAATATTTTAAAGTCACCGATTATCCGGGTGGTACTCCAGATTCCAAAGTTTCCAGAAATGGTAACGGAACTCTCACAATCATTAAGGGTACAAACAACACGAGTGCAATAAAAGCGGCGTTAATTGATGCACAAACCTATAATGGAATTGTTTATTTTCCCTCTCCTGAAAATGGAAATGCCTATCTCTATGATGATACTTTGTATCCAGCAGTAACATCAGGTGCGTTATGGAGAGGGGCTTCTATTTTGGGTGATGGTAAGACTGCGACCAAACTTATTTTTGATGGTGGAGATAAACCCGCGATACATGTAAAAGGTACTTCCGGATGGCCTACGAACATATTCCTTCACGGTATTTCACTTTACTCTGCCAATGATTTTGTGGGTGAAGGTTGGAAACTTCAGGGAATTACCGGTATCCGATTATCTGATTTTGCCGCTTATCGATTCGGTGACGGTGGTTTATCGTTCTCAAACGGTTCAGCAGCAGGTATTTTTACTGAATTCAATATCATTGAAGATGGCTGGTTAGAGAACAATAAGACGAACACAAAATTCAGGAAAGATGGTGGTGATGGTTCATTCCACGGCATCACTATGCGCAATGTTATCAGCAATAATCTGACGGGCCAGACTGGTCTTGATATCGGGACTGGGTGTGTAATTTATAATGCTGACTGGAATCAGGTCACGTTCTTTGGTGCATCGGGTGTCCAGTGGATATTGAACAATGGTTCAAGAAACGGTTTCGAAACCCTGTATTTTGAGGGCGATGGGACTGTTACTAATAATGGTAGTTGGAGCACTGCAGGTTACTGGCGTGTACAGAACTCAACTGGTGCAATTGTGGACACCTCGACGATACCATTTTTCAACGAGGGATACATTACTCCAACCAGCCCAACAGATGCCAACTTTTCTGCTGCTGGATTTACTTCTCTTGAGTCCTTGAAGCCGCTCATAAGTAATCAGGCATATCGAGGGTTGATGCGACTTCGTGGAAACAATGCCGAGGCGATTGCTGTAACTGGTTATGATTCTGGTACTTTTGAAAACCAGGGTCTAGCGATTGTATCTCAATCATTAGGCGACGGTATAAAGGACGTCATCCTTCGTCAGCTACTGCATTTGAATGGCATTACATCGTTTAGGCCAGAATACAGATTTAATTATATTGGTGGTTCGACGCAATTATCTATAAACTCTAATGGAAGACATACTGGAGTCATGGGTAAACGTGTTGTCGGTTCTATCACCGCTAATGCTGCTGCTCAGACCATATCATTGTCTGGATTACTCCCTGTTAATGATCAGGCTTATGATGTGGTGTTGGTTGTATCAACTCCTGGGGTCACTTCTAAAATAACCGGTGTTTTTACTGGAATGTATGACACCACCACCAACACTACACTAAAACCTGTTGATAATACCAGGACTGCTGGGACTGAGTTATCCATCTCTGCTTCCTCTGGAGTTAAAATAACTTCTGGTGGTCTTGTATCTATCACGCTTACAGCAACAGTAGATTGCACATATTCTTTAGTTGTTATAGGCAAAGGCGCATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f8d21b0c09d89f46fc78c2c973c0f148c81fdc30c6d7e969429f155181eb011
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Supandy,A., Van Tyne,D., Patel,R. and Parmar,K. — — GenBank