Protein

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Genbank accession
APD19444.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLAGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFNGSLIKAHQTDYLKASNGKSSIRSTVSRNNCFVLNTEQVITKTPTGGTNPTPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGSEAWQATPEWVATEMENRIKEDTTLNARYDVVREGSTVALKAKSATDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPSILDKYIIAVGTVGNSAYYQYNATTSTWKECGIYEAPYKFTNEPIYWYFDDTDTIQVKSLDIQPRAAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLSQNQQAVIPANSTVLTPKTAVVYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKEVLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIIDGEGTLPEFLPAGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVTGSNSTVVDLTMAFKGTGEFEYHVSDTYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLSSTEFSVRTTGTTELNIISTGYNIRVPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84221,39820 Da
isoelectric point:4,91751
aromaticity:0,10223
hydropathy:-0,24731

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
APD19444.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD19444.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9778
Central domain 133 331 200 0,1805
C-terminal 332 763 431 0,2146
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15519
[NCBI] 		1916127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD19444.1 [NCBI]
Genbank nucleotide accession
KY082667 [NCBI]
CDS location
range 37362 -> 39653
strand -
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGCGGTGGAGTTAAGTTCCAAGCTAAGTTAGCAGGTATTCCTAATAGCAGTTATATACGCTTGATTGACATCAATGGCGTTAATTATATTATGATCGTAGATACGGTTACAGGTACTTTAAAGATTTATAATTTTAATGGTTCTTTAATTAAAGCACATCAAACAGATTATCTTAAGGCTTCCAACGGCAAATCTAGTATCCGTAGCACAGTCTCTCGTAATAATTGTTTTGTATTAAACACCGAACAAGTTATTACTAAGACACCTACAGGAGGTACTAACCCAACACCTAATCCAAGTACTATGGGTTATATTAGTATTCGTTCTGGTCAATTCTCTAAGATGTATTCGGTAGACATCAAGTCAGGTTCTTATACCTTAAGTTTTGGTGTGGGTACATCAGGTAGTGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTGAGATGGAGAATAGGATTAAAGAGGATACTACTCTTAACGCACGTTATGATGTTGTACGAGAAGGTAGTACGGTTGCACTTAAGGCTAAGTCTGCTACAGATACAAACTTGCTGGTGATCGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCCAGCCGTGTACAAGGTAAACAGGATATCATTGCTAACCTACCTAGTATATTAGATAAGTATATTATTGCAGTAGGTACAGTAGGTAACTCTGCTTATTACCAATACAACGCTACTACGAGTACTTGGAAAGAGTGTGGTATCTATGAGGCACCATATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCTTAGATATTCAACCACGCGCAGCAGGTGATGATGATAATAACCCATTACCTAAGTTTGTGGATTTTGGTATTACAGGTATTAGTGCATACCAATCACGTTTAGTACTACTTAGTGGTTCATATGTTAATATGAGTGCTACAGCAGACTTTAATGTATATATGCGCACTACTGTGGAGGAATTACAGGATGATGACCCTATTGAGGTATCTAGTACCGCTTTGAGTGCTGCACAGTTCGAATATGCTGTTCCGTATAATAAAGATTTAGTTTTATTATCTCAGAATCAACAGGCTGTTATCCCAGCAAATAGTACCGTACTTACACCTAAGACAGCGGTCGTTTATCCAAGTTCAAAAGCCAATATTAGTATGGCTAGTGAGCCACAGGTTGTGTCTCGTAGTTTGTATTACACATATCAACGTGGTACAGATTACTATCAAGTTGGTGAGATGATTCCTAATGCTTATTCAGATGCTCAGTACTATGCGCAGAACTTAGCAGATCATATCCCACTATATGCTACAGGTGTTTGTACTTCAATCACAGGTAGTACTACAGATAATATGGCAGTGTTCAGTTCTGATCAAAAAGAGGTACTTGTACATCAATATCTATGGGCAGGTGAAGACCGTCCGTTAATGAGCTTCCATAAATGGGAACTACCTTATGATGTACTACATGTGCAATTTCTACAAGAGTATTTAGTATTGTTTATGGATGTGGGTGATGATTTAGTGGTTGGTACTATTAACGTACAGTTAAACCAGCTAGACAATAAACCTATCCCATTCTTAGATATTTACCAATACGTAGATATTATAGACGGGGAAGGTACATTACCTGAGTTCTTACCAGCAGGTGAATTAGTGGCTGCGGTATACAGTTCTGAAACTATGCGTCATGCTAAGGTTCAATATGAAATTGAAGGTACTAAGATTAAATGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCGCCTTTTGTTAAAGACGATAAAGGTCGAGTAGTCACTGGTAGTAATAGTACAGTAGTCGATCTTACAATGGCATTCAAGGGTACAGGTGAGTTTGAGTACCATGTTTCTGATACCTATGGAGATGTGTTTGATGGTGAAACATCAGCACAGGCTTGGTCAGAAGCACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAATTCCCGTGCGGTACATTATTAAGTTCGACAGAATTTAGTGTTAGAACTACTGGTACAACTGAGTTAAACATCATTAGTACTGGTTATAATATCCGTGTACCTAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc8ebdd16327ce0d267bd2221130a4719f9adaa05b942c998cea85483657d115
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome sequence of Acinetobacter baumannii SH-Ab 15519 phage Luo,T., Yang,Y., Wang,Y. and He,P. 2014-07-18 — GenBank