Protein

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Genbank accession
WGM49815.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFVRLFDYGNIAPSPAAIKKLVAGYNWVMVLGSNGKLYTRGSNSSGQLGLGDNTTRTSWTVTASDVIDVWCGQYATMIHKSDGTYQYTGRQYNVCMGTSSVNAWTSMQTVINQVNSQGTISEISLGNNFISILMSNGTIWSGGYNTGGQLGNASYSNSFSTLVQSIIPSGAVPKRIIAGINMCSFIAESGRLYYTGEVKGDTNSTSTVSFYNVFALSDRLPATVSTIAFISTVNGMVQGIARNNSTSVVTVYTGGDQSYGQAATNTAASTNILTTVVANQPQGNILDIGYGYGYYSNFVITDTGVYVAGNNSATSYYGQLSTGSTTNVLTYTKSITPDLNFKDVKIQSCYGKTYMTDGNKIYSSGTNLVSGGTASTIFVEDSPI
Physico‐chemical
properties
protein length:386 AA
molecular weight: 40975,16120 Da
isoelectric point:7,53983
aromaticity:0,10622
hydropathy:-0,05000

Domains

Domains [InterPro]
DC_0433
ATT
1–127
DC_0433 DC_0436
IPR009091
STR
6–221
IPR009091 IPR009091
IPR009091
STR
16–349
IPR009091
IPR051553
Unmapped
19–348
IPR051553
IPR000408
STR
36–79
IPR000408 DC_0433
IPR000408
STR
37–84
IPR000408
WGM49815.1
1 386
Architecture
ATT
STR
ATT 1-240 | STR 241-386
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGM49815.1
1 386
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9248
Central domain 17 230 215 0,7467
C-terminal 231 386 155 0,4886
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-230
C-terminal
231-386

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-M-J
[NCBI] 		3038267 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGM49815.1 [NCBI]
Genbank nucleotide accession
OQ718158 [NCBI]
CDS location
range 336296 -> 337456
strand -
CDS
ATGTTACCTTTTGTAAGATTGTTTGATTACGGGAACATTGCACCATCCCCTGCTGCCATTAAAAAATTAGTTGCAGGGTATAACTGGGTTATGGTATTGGGTAGTAATGGTAAATTATATACCCGTGGTTCCAATTCAAGTGGTCAGTTGGGTTTAGGAGACAATACAACCAGAACATCATGGACAGTAACTGCATCGGATGTCATTGATGTATGGTGTGGTCAGTATGCTACAATGATTCACAAATCAGATGGTACATATCAATACACAGGGCGACAATACAATGTGTGTATGGGTACATCATCTGTTAATGCATGGACTTCTATGCAAACTGTTATTAATCAAGTTAATTCCCAAGGAACAATTTCAGAAATATCACTAGGGAATAACTTCATTTCAATACTTATGAGTAATGGGACAATTTGGAGTGGTGGTTATAACACAGGAGGGCAGCTTGGGAATGCTTCTTATTCTAACAGTTTCTCTACTTTAGTACAATCAATTATACCAAGTGGTGCGGTTCCGAAAAGGATTATTGCAGGTATAAACATGTGTTCGTTTATTGCCGAAAGTGGTAGACTATATTACACAGGTGAAGTTAAGGGTGATACTAACAGTACTTCAACCGTGAGTTTTTATAATGTATTCGCATTATCAGATAGATTACCAGCAACTGTTAGTACTATAGCATTTATAAGTACTGTTAATGGTATGGTTCAAGGTATTGCTAGAAACAATAGTACGTCTGTTGTTACTGTGTATACTGGTGGTGACCAATCATATGGACAGGCTGCTACTAATACAGCAGCATCAACCAACATATTGACAACTGTTGTGGCAAATCAACCACAAGGAAATATATTAGATATAGGATATGGGTACGGATATTACTCTAACTTTGTTATTACTGACACAGGTGTATACGTTGCTGGTAATAACTCAGCGACTTCATACTATGGACAATTAAGTACAGGTTCAACTACTAACGTATTAACTTACACTAAATCTATTACTCCTGATTTGAATTTCAAAGATGTTAAAATCCAAAGTTGCTATGGTAAAACATATATGACAGATGGAAACAAAATATATTCAAGTGGTACTAACCTAGTATCTGGTGGTACTGCTAGTACTATATTTGTTGAAGATTCACCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6e9c095a4f29cee8d79a4b06aebe2d50f1f9c52dfa94102bd116afaa8ee5dc5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel E. coli Jumbo phage vB_Ec-M-J Kusradze,I., Rigvava,S., Karumidze,N., Goderdzishvili,M., Lossouarn,J. and Petit,M.A. 2016-10-04 — GenBank