Protein

View in Explore
Genbank accession
YP_010355481.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MANIQMHYDWSHALAALYPNAEWSVSVDKNDNQSLNWLDSSPRPNEADLEAWCVEKSRLEPMRLLRRERDKEMEFCNWRVVKAMSLGEELPPVWKNYLQALRDLPQNTNPDQIRMSDEDFKKIDRSSVNWPTPPEDHHYPITLKDLYKNITNVFDY
Physico‐chemical
properties
protein length:156 AA
molecular weight: 18564,64400 Da
isoelectric point:5,08552
aromaticity:0,10256
hydropathy:-0,88526

Domains

Domains [InterPro]
DC_0890
STR
1–120
DC_0890
G3DSA:6.10.140.1310
STR
22–102
G3DSA:6.10.140.1310
IPR031893
ENZ
63–135
IPR031893
YP_010355481.1
1 156
Architecture
STR
ENZ
STR 1-120 | ENZ 121-135 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010355481.1 [NCBI]
Genbank nucleotide accession
NC_062735.1 [NCBI]
CDS location
range 103827 -> 104297
strand +
CDS
ATGGCTAACATTCAGATGCATTATGATTGGTCACACGCCCTCGCTGCATTATATCCAAATGCCGAGTGGTCTGTTTCTGTCGATAAAAATGATAACCAAAGTCTTAATTGGTTGGATTCATCACCTCGTCCAAATGAAGCAGATTTGGAAGCATGGTGTGTTGAAAAATCAAGACTAGAACCTATGCGTCTTTTGAGAAGAGAACGTGATAAAGAGATGGAATTTTGTAATTGGAGAGTTGTAAAAGCAATGTCTCTAGGAGAAGAACTTCCACCGGTATGGAAAAATTATCTACAAGCACTTCGCGATTTGCCACAAAATACAAATCCCGATCAAATCAGAATGAGTGATGAAGATTTTAAAAAAATTGATCGCTCTAGTGTAAATTGGCCAACTCCACCAGAAGATCATCATTATCCTATCACCCTAAAAGATTTATACAAAAACATAACAAACGTTTTTGATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fbeeecf80f177e5a7d16b29e1c683c20ad807e71be2668e7266184a0502ae09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8005
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank