Protein

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Genbank accession
WGM49583.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MSISFNNPLDTMTSTGANGSLELIVLGGTPTNPRPIRFNSSSVILPVQALPAGEQGAMVFDRNELVLKYHNGTSWIAVYDTDTILEPIRISLDEVNRKLNLKVETVTYSSSAVPSASISGTNLNIVFPTPSSSGSGPTGLYTSMKPGAITQYSLTSGQTVASIREQMSGVTNGQSGRNGTQGSPWKTSDGWCFADGMWWQWVGENGTITKQVPNLNQEAYLKGITTSGVTKTDSVIASSASISGTAISIAQLPPHSFSFSGTTGAAGRHGHSQALKGMDRSGLNALTSSNDNGIPTVINNINEAPDHVHSFSGSTNTVGSGQAHTHGISNIDVPHFNVAYLYNIAESNVALSEKVANTRYVLKTGDTMSGSLSIANSATIRSDDTSLVLYFRNAAGTTERAAIYHSSSTNTLRLRSNGGSEVTINSSGVLYAPSVTGASLSISGNTATVASKNIVRSINGNNADASGNVTLTLGAVQDVRLSKRTTTRSVPDSSWNYVPEGATLDGLFISVNGSSGTHVEGLSWRYTQKLVNGVWTNVVVES
Physico‐chemical
properties
protein length:542 AA
molecular weight: 56869,28570 Da
isoelectric point:6,60045
aromaticity:0,06273
hydropathy:-0,19299

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGM49583.1
1 542
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9380
Central domain 176 374 200 0,0735
C-terminal 375 542 167 0,9278
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-374
C-terminal
375-542

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-M-J
[NCBI] 		3038267 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGM49583.1 [NCBI]
Genbank nucleotide accession
OQ718158.1 [NCBI]
CDS location
range 208511 -> 210139
strand +
CDS
ATGAGCATAAGTTTTAATAACCCACTGGATACTATGACTAGTACTGGTGCTAATGGATCTTTAGAACTAATAGTGCTTGGTGGTACACCAACTAATCCAAGACCTATTCGTTTTAATTCATCTTCTGTCATTTTACCAGTACAGGCATTGCCAGCAGGTGAGCAAGGTGCTATGGTATTTGATAGAAATGAGTTGGTGTTGAAATACCACAACGGTACAAGTTGGATTGCAGTATATGATACTGATACAATTCTTGAACCAATCCGTATTTCACTCGATGAAGTGAACCGTAAATTGAATTTAAAAGTTGAAACAGTAACATATAGTAGTAGTGCTGTCCCAAGTGCGAGCATTAGTGGTACGAATTTAAATATTGTATTCCCTACTCCATCAAGTAGCGGTAGTGGCCCAACAGGTCTTTACACTTCAATGAAGCCTGGTGCAATTACCCAGTACTCATTGACTTCTGGACAAACTGTTGCTAGTATTCGTGAACAGATGTCTGGAGTAACTAATGGTCAAAGTGGTCGTAATGGTACACAAGGTTCTCCGTGGAAAACTTCTGATGGTTGGTGTTTTGCTGATGGAATGTGGTGGCAATGGGTTGGTGAAAATGGTACAATCACTAAACAAGTTCCAAATCTTAACCAAGAAGCATACTTGAAAGGCATTACCACATCAGGCGTAACTAAAACTGATAGTGTGATTGCAAGTAGTGCATCAATTAGTGGTACTGCGATATCAATTGCTCAACTTCCACCGCACTCATTTAGTTTCAGTGGAACTACTGGTGCTGCTGGTCGTCATGGTCATAGCCAAGCACTAAAAGGTATGGACAGAAGTGGTCTTAATGCGTTAACATCCAGTAACGACAACGGAATCCCAACTGTAATTAATAACATTAACGAAGCACCTGATCACGTGCATAGTTTCAGTGGTTCTACGAATACTGTTGGTAGTGGTCAAGCACACACCCACGGAATTAGCAATATTGACGTACCACACTTTAATGTGGCATACTTATATAACATTGCTGAGTCCAACGTTGCTTTGAGTGAAAAAGTTGCAAACACTCGTTATGTACTGAAAACTGGTGATACAATGTCTGGTTCATTGAGTATTGCAAACAGTGCAACAATTCGTTCAGACGACACATCTTTGGTACTTTACTTCCGTAACGCGGCAGGAACTACTGAACGTGCAGCAATTTATCATAGTTCATCAACAAATACATTACGTTTGAGAAGTAATGGTGGTTCGGAAGTTACAATTAACTCATCTGGTGTACTTTATGCCCCATCAGTAACTGGTGCATCATTGTCTATTTCTGGAAACACTGCTACTGTTGCTAGTAAAAACATCGTCAGATCTATTAATGGTAACAACGCTGATGCAAGCGGTAACGTAACTTTAACTCTAGGTGCTGTACAAGATGTTCGTTTAAGTAAAAGAACAACTACGCGAAGTGTTCCTGATTCTTCTTGGAACTATGTACCAGAAGGTGCTACACTTGATGGGTTGTTTATTTCAGTAAATGGTAGTTCAGGTACACACGTTGAAGGTTTGAGTTGGAGATATACACAAAAACTAGTAAATGGTGTATGGACTAACGTAGTAGTGGAGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b498cc2d20c78ae1dbab8d3d937da86497eac7b9ca47972400e8fc5cc059d59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel E. coli Jumbo phage vB_Ec-M-J Kusradze,I., Rigvava,S., Karumidze,N., Goderdzishvili,M., Lossouarn,J. and Petit,M.A. 2016-10-04 — GenBank