Protein

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Genbank accession
YP_009833912.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSFSDPIKISNLPNKDTLSEGSVFPTVDSAGNETGKVSIGTLREVLDLSNAFSTIEEGMSKTIVNEDFFVYTDENRKELALRYRKVGSGSVVYVDENNAPILYTTNRFQISQPIQVSSFSDIKGLKNLRDKQKVELTIELNARVYNRGTFIVDLTDKTTEDDGGVNLVTNSGVRLSRVIEDGNMELVWFKSESNSWDDAFDGLIKYRTKFTSNAGKVFLPAMKIVLTKPVILPYFNKGAKCSWFLEGAGSAPDNGTVLSFNIPRSTALANGWDNVGAIDNWGSEFKFNSLTLCRLCVEGISTKIANPGDEVGFAFCHGVKCRTTGSLWEDVVIQNFRGSGLYLDNAFDNTFNRVGVFASGRLNDGKDYMSYVDIGDPANQAFPPVWVTSSRQGDASNFLSWYGGSFELNNCTPFLKVDGGIQIHFTNLHSERPGRGSGMTGSLPTGTFAQVQGEVWFTQCGISNFSQSVALGPYANVQINDCPRFSGGISLINPSAKGKVRLNITNSFIGDAYFTGSIETDFRFVNTQFASLRLPVVSGQVAITNCLVLGNVDIVAGSGSILQSASGIRMVNTVIQGSVTGDANSQRITLLGCHVLGDVTLGNGNCTVLGNTILGTVSVPSQPSNFVMGIHVQSPNVISVKTSPSEISGTVRKGQVAIAYDGTATDSMWICNTAGVGAAAKWSKLVMA
Physico‐chemical
properties
protein length:688 AA
molecular weight: 74103,65870 Da
isoelectric point:5,62259
aromaticity:0,09157
hydropathy:-0,06584

Domains

Domains [InterPro]
DC_1164
ATT
4–120
DC_1164
DC_1709
STR
109–685
DC_1709
IPR059934
RBD
115–179
IPR059934
YP_009833912.1
1 688
Architecture
ATT
STR
ATT 4-120 | STR 121-685 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009833912.1
1 688
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,9941
Central domain 198 618 422 0,9917
C-terminal 619 688 69 0,9078
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-618
C-terminal
619-688

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_ 2050HW
[NCBI] 		2024252 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus mv2050HW >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009833912.1 [NCBI]
Genbank nucleotide accession
NC_048668.1 [NCBI]
CDS location
range 181599 -> 183665
strand -
CDS
ATGTCTTTTAGCGACCCAATTAAAATATCTAATTTACCAAATAAAGATACTCTATCGGAAGGATCGGTATTTCCTACGGTAGATTCGGCTGGTAATGAGACCGGTAAAGTTTCTATCGGTACTTTGAGAGAGGTACTCGATCTTTCTAATGCGTTTAGCACCATTGAAGAAGGGATGTCTAAGACCATTGTTAATGAGGACTTCTTTGTCTACACTGATGAGAATCGTAAAGAGTTAGCGCTAAGGTACCGAAAAGTGGGTTCTGGGTCAGTCGTCTACGTCGACGAAAATAACGCACCTATTCTTTACACCACCAACCGTTTCCAAATAAGTCAGCCTATCCAGGTATCTTCGTTCAGTGACATCAAGGGTTTGAAGAATCTGAGGGATAAGCAGAAGGTAGAGTTAACGATTGAACTTAACGCCAGGGTCTATAACCGCGGAACGTTCATTGTAGACTTAACCGATAAAACTACAGAAGATGACGGCGGTGTTAATCTAGTCACTAACTCAGGTGTCCGATTGTCTCGAGTTATTGAAGACGGCAATATGGAACTGGTCTGGTTCAAAAGTGAGAGTAATAGCTGGGATGATGCATTTGACGGACTAATCAAATACCGTACTAAGTTCACCAGTAATGCTGGAAAGGTATTTTTACCTGCCATGAAGATCGTCCTTACCAAGCCCGTCATTCTACCATACTTTAATAAGGGAGCTAAATGTAGTTGGTTCCTGGAAGGCGCAGGCTCAGCTCCGGACAACGGTACGGTGCTATCGTTCAATATTCCTCGTTCGACAGCGCTAGCTAACGGATGGGACAACGTCGGAGCGATTGATAATTGGGGTTCTGAGTTCAAGTTTAACTCACTGACTCTATGTAGGTTATGCGTCGAGGGGATATCTACAAAGATAGCGAACCCAGGTGACGAGGTAGGATTCGCCTTTTGTCACGGAGTTAAATGTCGAACCACAGGCTCTCTTTGGGAAGACGTAGTCATCCAGAACTTTAGAGGATCCGGCCTTTATCTCGACAACGCCTTTGACAATACCTTTAACCGCGTCGGTGTCTTTGCTTCTGGTCGTTTAAACGACGGTAAAGACTATATGAGTTACGTCGATATCGGCGACCCGGCCAACCAAGCGTTCCCTCCAGTATGGGTCACTTCCTCAAGACAGGGAGATGCCTCTAACTTCCTGAGCTGGTATGGCGGTAGTTTCGAACTCAATAACTGCACGCCGTTCCTTAAGGTAGATGGGGGTATTCAGATACACTTTACCAACTTACACTCAGAGAGACCTGGGCGCGGAAGTGGGATGACCGGTTCTCTACCTACCGGTACGTTTGCTCAAGTACAAGGTGAAGTTTGGTTTACTCAATGCGGCATTAGTAACTTCAGTCAATCGGTCGCATTAGGTCCGTACGCTAACGTCCAGATTAATGATTGTCCTCGTTTTAGCGGCGGTATAAGTCTGATTAACCCATCGGCTAAAGGTAAAGTAAGACTTAACATCACCAACTCATTTATTGGCGATGCCTATTTCACCGGATCCATTGAAACCGATTTCCGATTCGTAAATACCCAATTTGCTAGCCTTAGACTCCCGGTTGTATCAGGTCAGGTTGCAATAACTAATTGCTTGGTTTTAGGTAATGTTGACATCGTGGCCGGTAGTGGTTCTATACTACAGTCTGCATCGGGGATAAGGATGGTAAATACGGTAATTCAAGGAAGCGTAACAGGAGACGCGAACAGTCAGCGAATAACACTACTCGGTTGTCACGTTCTCGGAGATGTGACCTTGGGTAACGGCAACTGTACAGTACTTGGGAACACTATCCTAGGAACAGTATCCGTCCCATCACAACCGAGTAACTTCGTAATGGGTATCCACGTTCAGTCACCTAACGTGATATCCGTTAAAACATCCCCGTCAGAAATTTCCGGAACAGTACGTAAGGGACAGGTAGCAATCGCATACGACGGAACCGCTACGGACTCCATGTGGATTTGTAATACTGCCGGAGTAGGCGCTGCGGCTAAATGGTCTAAACTAGTTATGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
243cbd74463588caa88ff2782760f23b65b51966db4a756793a66f678a3ede40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7966
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50