Protein

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Genbank accession
CAM0006586.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MSELKDFLNSGGTHAPQINENTERLDTQITNPNLLINGEMAIWQRGEDFAGSLADGYFADRWQCNGAFTNVQKGSHSLDDVDAASQYVLLFDKSSGASAYIDQPIETSTLIMNNNTVSFSLVVRDQATLNNLVSVQVINYEKNAAMGSLDLSAATVKPIGATTRLHVSGTFNTSAVATTSEHTVFRIEIGTGAMVAGWVNEVKLELGAGATPFVPDTPADALAKCQRYFYRSTNTETLMVSCWSTPSVYGSVNAPIAMRKPPIWLFEEASFFYDGGSFPVTPAVDVASTQNARFTFNHTATVTRTASGWLQTKFSADAEL
Physico‐chemical
properties
protein length:320 AA
molecular weight: 34629,21450 Da
isoelectric point:4,79507
aromaticity:0,09688
hydropathy:-0,12438

Domains

Domains [InterPro]
DC_0568
STR
2–320
DC_0568
CAM0006586.1
1 320
Architecture
STR
STR 2-320
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0006586.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,1245
Central domain 216 309 95 0,0004
C-terminal 310 320 10 0,9991
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-309
C-terminal
310-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D239
[NCBI] 		3104997 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0006586.1 [NCBI]
Genbank nucleotide accession
OZ196063.1 [NCBI]
CDS location
range 25281 -> 26243
strand +
CDS
ATGAGTGAATTAAAAGACTTTTTAAACAGTGGAGGAACACATGCTCCACAAATCAATGAAAACACGGAGAGGTTGGATACTCAGATTACCAACCCTAATCTCCTAATTAATGGTGAGATGGCTATATGGCAGCGTGGTGAAGACTTTGCGGGATCCCTAGCAGACGGTTACTTCGCTGACCGCTGGCAGTGTAATGGAGCATTTACCAATGTACAGAAGGGTAGTCACTCGTTGGATGACGTAGATGCAGCTTCTCAGTATGTACTACTCTTCGATAAGAGTTCTGGTGCTTCTGCATATATAGATCAGCCTATAGAAACATCCACTCTTATTATGAACAATAATACAGTGAGCTTCTCTTTAGTTGTACGTGATCAAGCTACTTTGAATAATCTAGTCTCAGTACAGGTTATTAACTACGAAAAAAATGCTGCAATGGGCTCTTTGGATCTATCAGCGGCTACTGTAAAACCTATAGGTGCTACAACACGATTGCATGTTTCTGGTACCTTTAATACCTCAGCAGTAGCTACTACTAGTGAACACACTGTATTTCGTATCGAGATAGGTACTGGTGCTATGGTGGCTGGTTGGGTAAATGAAGTAAAACTTGAATTAGGTGCGGGTGCTACACCATTTGTACCGGATACCCCTGCGGATGCCTTGGCTAAGTGTCAGCGTTATTTCTACCGTTCAACTAATACAGAAACATTGATGGTTTCATGTTGGAGCACGCCTAGTGTATACGGGTCAGTGAACGCTCCAATAGCTATGCGCAAACCACCAATTTGGCTATTTGAAGAAGCAAGTTTCTTTTATGACGGTGGTAGCTTTCCTGTTACACCCGCTGTTGACGTTGCAAGTACACAAAATGCAAGATTTACCTTTAATCATACAGCAACGGTAACCCGTACCGCTTCAGGTTGGTTACAAACAAAGTTTTCGGCAGACGCAGAACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb277800392d6f90459f95a14290646e99ecc968d3961fa70f90b4b44438320f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50