Protein

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Genbank accession
XKC19989.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQGILIDLNDGRPAMEITAGLRAPAVTGSINTNGLSTPASSWDFGLTMSHGSTAFCLPTKAVHVDAYDVIPEVYYMNGFQKVNDGTGRITLSNFNGANGRIIDFAGNCFEILPASSSSSPGILVENSTDFLAISSNSRLMSAAWVGGIQVNGSSALPVSGIPFGKWDNPNVSLESDGSTIWCRDVNYGGIDDVAASTYVQLVIFRNEPPVAGPGLTMSNSSGQIVFSSVRRPFVLSGFIQISNVYQSINGGFFPLLRCGATTRVTGGYNNLRYKGICMSGGNVRAVPGTVIGNYSTQSGAQFPFDTNISMALPFIPNFY
Physico‐chemical
properties
protein length:320 AA
molecular weight: 33848,76630 Da
isoelectric point:5,33675
aromaticity:0,10000
hydropathy:0,08594

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
XKC19989.1
1 320
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC19989.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9896
Central domain 14 212 200 0,0193
C-terminal 213 320 107 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-212
C-terminal
213-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-G8
[NCBI] 		3378296 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC19989.1 [NCBI]
Genbank nucleotide accession
PQ433350 [NCBI]
CDS location
range 3494 -> 4456
strand -
CDS
ATGCCGCAGGGTATATTGATTGACCTTAATGACGGAAGGCCAGCGATGGAGATTACGGCAGGGTTAAGGGCACCTGCTGTGACTGGATCAATAAATACCAATGGACTTTCAACCCCAGCAAGTTCGTGGGATTTTGGATTGACAATGTCTCATGGCTCTACGGCTTTCTGCCTACCAACGAAGGCAGTCCACGTTGACGCTTACGATGTTATACCAGAAGTTTATTACATGAACGGATTCCAAAAGGTAAATGACGGCACTGGCAGGATAACACTTAGTAACTTTAACGGAGCCAATGGTCGAATAATTGACTTTGCTGGTAATTGTTTTGAAATTCTACCAGCCTCATCTTCATCAAGCCCAGGAATACTAGTTGAAAACTCAACTGACTTCTTGGCAATATCAAGCAACTCACGGCTAATGTCAGCGGCATGGGTTGGTGGTATTCAGGTTAACGGATCATCAGCACTGCCAGTCAGTGGAATACCATTCGGTAAGTGGGATAATCCAAACGTGTCTCTGGAGAGTGATGGGAGTACGATATGGTGCCGTGATGTAAACTATGGTGGTATAGATGATGTGGCGGCAAGCACTTACGTTCAGTTGGTGATATTCAGGAATGAACCTCCAGTAGCTGGACCTGGTCTTACAATGTCAAATAGCTCTGGTCAGATTGTTTTCTCCAGCGTTAGGCGACCATTTGTACTTAGTGGATTTATACAAATAAGCAATGTATATCAGTCAATAAATGGTGGATTCTTCCCGCTTCTTAGATGTGGCGCTACGACTAGAGTTACTGGAGGGTATAACAACTTGCGATACAAGGGCATTTGCATGTCTGGTGGTAACGTTAGAGCAGTGCCAGGTACTGTAATTGGTAACTACTCGACGCAATCAGGCGCTCAGTTCCCTTTCGACACAAATATATCAATGGCACTTCCATTCATTCCAAACTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8bf80286b06010196b0915c9b47aa7058326baa19040cb6bece44bf425a5207d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8382
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50