Protein

View in Explore
Genbank accession
XAL80166.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MKQILDSAKTYLNTHDKLKTACLIALELPSSSGSAATYIYLTDYFRDVTYNGILYRSGKVKSIGSHKQNRELSIGSLSFTITGTAEDEVLKLVQNGVSFLDRTITIHQAIIDEEGNILPVDPDTNGPLLFFRGKITGGGIKDNVSTSGIGTSVITWNCSNQFYDFDRVNGRYTDDASHRGLEVVNGTLQPSNGAKRPEYQEDYGFFHSNKSTTILAKYQVKEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGVQKIPGIPIFADTELNNPNIVYVVYAFSEGEIDGFLDFYIGDSPMICFDETDSNTRTCFGRKKLVGDTMHRLAAGTSTSQPSVHGQEYKYNDGNGDIRIWTFHGKPDQTAAQVLVDIAKRKGFYLQNQNGNGPEYWDSRYKLLDTAYAVVRFTINENRTEIPEISAEVQGKKVKVYSSDGSVKADKTSLNGIWQLMDYLTSERYGANITLDQFPLQKIISEAKILDIIDESYQVSWQPYWRYIGWSDSISEHRQVVQLNTILDTSESVFKNVQGVLDSFGGAINNLSGEYRITVEKHSTTPLKIGFLDTYGDLDLSDTTGRNKFNSVQASLVDPALSWKTNSITFYNSKFKEQDKGLDKKLQLSFANITNYYTARSYADRELKKSRYSRTLSFSVPYKFIGIEPNDPIAFTYERYGWKDKFFLVDEVENTRDGKINLTLQEYGEDVFINSDQVDNSGNDIPDISNNVLPPRDFKYTPTPGGMIGAIGKNGELSWLPSLTNNVVYYSIAHSGHVDPYIIQQLENNPNERMIQEIIGEPAGLTIFELRAVDINGRRSSPVTLSVDLNSARNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDKIPEEEIIPEIYYTLEIHDSQDRMLRSIRIEDAYTYDYLLTYNKADFALLNSGALGINRKLRFRIRAEGENGEQSVGWATI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107013,52630 Da
isoelectric point:5,38404
aromaticity:0,11064
hydropathy:-0,44204

Domains

Domains [InterPro]
DC_0187
STR
230–946
DC_0187
IPR032876
ATT
601–686
IPR032876
XAL80166.1
1 949
Architecture
STR
ATT
STR
STR 230-600 | ATT 601-686 | STR 687-946 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAL80166.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 311 311 0,9240
Central domain 312 524 214 0,3251
C-terminal 525 949 424 0,0065
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-311
Central
312-524
C-terminal
525-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SCF
[NCBI] 		3143147 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAL80166.1 [NCBI]
Genbank nucleotide accession
PP735124.1 [NCBI]
CDS location
range 15067 -> 17916
strand +
CDS
ATGAAGCAGATACTCGATAGTGCTAAAACATATCTTAATACTCATGACAAGCTAAAAACAGCTTGTCTTATAGCTTTAGAGCTTCCTAGTTCATCAGGCTCTGCTGCTACTTATATTTATTTAACTGACTACTTTAGAGATGTTACTTATAACGGAATATTATATAGATCGGGTAAAGTAAAAAGTATCGGCTCCCATAAACAAAACCGTGAACTATCTATTGGTAGCCTATCTTTTACCATAACTGGTACAGCAGAAGATGAAGTATTAAAACTAGTTCAAAATGGAGTATCTTTCTTAGATAGAACTATCACTATACATCAAGCTATAATTGATGAAGAAGGTAATATTCTTCCTGTGGATCCTGATACTAATGGACCTTTACTATTCTTTCGTGGTAAAATTACTGGCGGCGGAATAAAGGATAATGTTAGTACTTCCGGTATAGGAACTTCTGTTATAACATGGAACTGTTCTAATCAGTTCTATGATTTTGATAGAGTGAATGGTCGTTATACTGATGATGCTTCTCACCGAGGTCTTGAAGTTGTTAATGGGACTCTTCAGCCATCAAATGGTGCTAAACGTCCTGAGTACCAAGAAGATTATGGATTCTTCCACTCTAATAAGAGTACAACTATTCTAGCTAAATACCAAGTTAAAGAAGAACGATATAAATTACAGTCTAAGAAAAAGTTATTTGGTTTGTCTAGAAGCTATAGCCTTAAAAAATACTACGAGACTGTAACTAAAGAAGTTGACCTAGACTTTAACTTAGCAGCTAAATTTATACCTGTAGTATATGGTGTTCAGAAAATTCCTGGTATACCTATTTTTGCAGATACTGAGCTAAATAATCCTAATATAGTGTATGTAGTCTACGCTTTCTCGGAAGGAGAAATTGATGGATTCCTAGACTTCTATATTGGTGACAGCCCAATGATCTGTTTCGATGAAACGGATTCCAATACTAGAACCTGCTTCGGTCGTAAGAAACTAGTAGGTGATACAATGCATAGACTAGCTGCTGGTACAAGTACTTCTCAGCCTTCTGTTCATGGTCAAGAGTATAAGTATAACGATGGTAATGGTGACATAAGAATATGGACTTTTCATGGCAAACCAGACCAGACAGCAGCTCAAGTATTAGTGGATATTGCTAAAAGAAAAGGTTTCTATTTACAGAATCAAAATGGCAATGGCCCAGAATACTGGGATTCTCGTTATAAGCTCTTAGACACAGCCTACGCTGTAGTTAGATTTACTATTAATGAGAATAGAACTGAAATTCCAGAAATTAGTGCTGAAGTACAAGGTAAGAAAGTCAAAGTATATAGCTCTGATGGGTCTGTTAAGGCTGATAAAACCAGCCTTAACGGTATCTGGCAGCTCATGGACTATCTAACCTCTGAACGTTATGGAGCTAATATAACTCTAGATCAGTTTCCACTACAAAAAATTATATCAGAAGCAAAAATTCTAGATATAATTGATGAATCTTATCAGGTTAGCTGGCAACCCTATTGGAGATATATTGGTTGGAGTGATTCTATTTCTGAACACCGCCAAGTAGTCCAGTTAAACACTATATTAGATACCTCCGAATCAGTATTTAAAAACGTTCAGGGAGTACTGGACTCTTTTGGTGGTGCTATAAATAACTTATCTGGTGAGTATAGAATAACTGTAGAGAAGCACTCTACAACTCCTTTGAAAATAGGTTTTCTAGATACTTATGGGGACTTAGACTTATCTGATACTACTGGTAGGAATAAGTTTAACTCAGTACAAGCATCTTTAGTAGATCCTGCACTAAGCTGGAAAACAAATTCTATTACATTCTACAATTCTAAGTTTAAAGAACAAGATAAGGGTTTAGATAAAAAACTTCAGCTATCTTTTGCAAATATTACTAACTACTACACCGCTCGTAGTTACGCGGATAGAGAGCTTAAAAAGTCCAGATACTCACGTACACTTAGCTTCTCAGTACCCTATAAGTTCATTGGTATAGAGCCGAATGATCCTATTGCTTTTACTTACGAGCGTTATGGGTGGAAAGATAAGTTCTTCTTAGTAGATGAAGTAGAAAATACTCGTGATGGTAAGATTAATTTAACACTACAAGAGTATGGTGAGGATGTATTCATCAACTCTGATCAAGTGGATAATAGTGGCAATGATATTCCAGATATTAGTAATAATGTTCTTCCTCCTAGAGATTTTAAGTATACACCAACTCCTGGTGGTATGATAGGTGCTATAGGTAAAAACGGAGAACTATCTTGGCTACCTAGTCTTACTAATAACGTAGTGTATTATTCTATAGCTCATTCAGGTCATGTGGATCCTTATATAATTCAGCAGTTAGAGAATAACCCTAATGAAAGGATGATTCAGGAGATTATAGGTGAGCCTGCTGGTTTAACTATTTTTGAATTACGCGCTGTTGATATTAATGGTAGACGTAGTTCTCCTGTTACTCTTTCCGTGGATCTTAACTCTGCTAGAAACTTGAGTGTAGTTAGTAACTTCAGAGTAACTAATACAGCTTCTGGAGACGTAACTGAATTTGTCGGCCCAGACGTGAAACTTGCTTGGGATAAAATACCTGAAGAAGAAATAATTCCAGAAATTTATTATACTCTAGAAATACATGATTCTCAGGATAGAATGCTTCGTAGTATTAGGATAGAGGATGCCTATACTTATGACTATCTATTAACATATAATAAGGCGGATTTTGCACTATTAAACTCTGGTGCTTTAGGAATTAATCGTAAACTACGATTCAGGATTAGAGCAGAAGGGGAAAATGGTGAGCAATCTGTTGGTTGGGCTACTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0914cfa6a881e3638e557d84daa95b9a1aabaee6b63fbe3e0f8c730cb08f87f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8140
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a lytic phage that eliminates Salmonella Enteritidis from contaminated fresh produce Dapuliga,C.C. and Schmidt,S. 2020-12 — GenBank