Protein

View in Explore
Genbank accession
QPZ53601.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAQLSTKIKEYCKANGVSNVDFTKDVMLQDDSDGQGAYIKEWNLDIAQPTQAQLDALETQAQTYENNQQIIATRKKLYGSWESQLEEIYDNGIDSWKARIQQIKIDNPKE
Physico‐chemical
properties
protein length:110 AA
molecular weight: 12616,84530 Da
isoelectric point:4,61075
aromaticity:0,08182
hydropathy:-0,86273

Domains

Domains [InterPro]
DC_0890
STR
1–110
DC_0890
IPR019094
STR
11–65
IPR019094
IPR035950
STR
16–68
IPR035950
IPR035950
STR
21–66
IPR035950
Coil
Unmapped
47–67
Coil
QPZ53601.1
1 110
Architecture
STR
STR 1-110
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC100P
[NCBI] 		2796522 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53601.1 [NCBI]
Genbank nucleotide accession
MW273924.1 [NCBI]
CDS location
range 13947 -> 14279
strand -
CDS
ATGGCACAACTAAGTACAAAAATAAAAGAATACTGCAAAGCTAATGGAGTTAGCAATGTAGATTTTACAAAAGATGTTATGTTGCAAGATGACAGCGATGGTCAAGGTGCATACATTAAAGAATGGAACTTAGATATTGCACAACCTACTCAAGCACAATTAGATGCTTTAGAAACACAAGCACAAACTTATGAAAACAACCAACAAATAATTGCTACTAGAAAAAAATTATATGGAAGTTGGGAAAGCCAACTTGAAGAAATTTATGATAATGGTATTGATAGTTGGAAAGCTAGAATACAACAAATTAAAATTGATAATCCTAAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
92b63bf4a56dc5618a4819c48ab0a17279dd8a85fb79b014979bbfce477f7b82
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9708
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank