Protein

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Genbank accession
XUK82051.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNNTYQHVSNESVYVEFDPTGSNFDSSITNVQAALASISAYGVKGVPDASEAEKGVIQLATEQEVLDGFNSTKAVTPATLNARLQYPNASETQYGVTKYATQEEAIAGTLDTVSITPLKLNQTIDNTFSTRYSTETTNGVIKIATQTAALAGSDDTTAMTPLKTQQLAIKLISQIAPNNDPASESITGVVRLATVAQTRQGTLREGYSISPYTFMNSVATQEYKGVIRLGTQAEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGVAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIQMFAGDSAPPGWVLCHGGTISGNQFPDYRNVVGTRFGGDWNNPGIPDMRGLFVRGAGTGSHILNNRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYQRHEAPFGASVYQGYLGTRKYADWDNASYFTNDGFELGGHRDATGTLNREGLIGYETRPWNISLNYIIKVHY
Physico‐chemical
properties
protein length:516 AA
molecular weight: 55111,19680 Da
isoelectric point:5,52250
aromaticity:0,08140
hydropathy:-0,40698

Domains

Domains [InterPro]
DC_0176
STR
1–437
DC_0176
IPR015173
STR
246–324
IPR015173 IPR037053 IPR044916
SSF69349
STR
246–346
SSF69349 IPR027448
G3DSA:2.10.280.10
Unmapped
246–286
G3DSA:2.10.280.10 SSF88874
IPR011083
ATT
337–392
IPR011083
XUK82051.1
1 516
Architecture
STR
ATT
STR
STR 1-323 | ATT 324-392 | STR 393-514 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage NHEP10
[NCBI] 		3420449 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUK82051.1 [NCBI]
Genbank nucleotide accession
PQ511148 [NCBI]
CDS location
range 24839 -> 26389
strand +
CDS
ATGAGTAACAATACATATCAACACGTTTCGAACGAATCAGTATATGTTGAATTTGACCCTACCGGGTCAAATTTTGATAGTTCAATAACCAATGTCCAGGCCGCCTTAGCCTCAATTAGCGCATATGGTGTTAAAGGTGTTCCGGACGCAAGCGAAGCAGAAAAAGGTGTAATTCAATTAGCGACAGAACAAGAAGTTCTTGATGGATTTAATAGTACTAAAGCCGTTACACCCGCCACATTAAATGCAAGACTTCAGTATCCGAACGCGTCAGAAACACAGTACGGCGTAACTAAATATGCAACACAAGAGGAGGCCATTGCTGGCACTTTAGACACTGTTTCTATTACTCCGCTTAAATTAAACCAAACTATTGATAACACGTTCTCTACTCGTTATTCAACAGAAACAACTAACGGTGTTATTAAAATTGCAACTCAAACCGCTGCACTTGCCGGGTCTGATGACACCACAGCAATGACTCCGCTTAAAACGCAGCAATTAGCAATAAAATTAATTTCTCAAATAGCTCCTAATAACGACCCGGCTTCAGAATCTATTACCGGTGTTGTGCGTTTAGCTACGGTGGCCCAAACACGTCAAGGAACTCTTCGCGAAGGATATTCAATTTCCCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAAGGTGTTATACGTCTAGGAACACAAGCGGAAATTAATAGTAATTTGGGAGATGTTGCTGTAACAGGTGAAACGCTAAATGGTAGAGGAGCTACCGGTTCTATGCGTGGAGTCGTAAAATTAACGACGCAGGCCGGTGTTGCACCCGAAGGCGATAGCTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACACGCGGTGGGCAAACTATTAATGGTTCTTTAAATTTAGATCACCTCACAGCAAATGGAATTTGGTCGCGTGGCGGAATGTGGAAAAACGGTGACCAGCCAGTTGCAACAGAGAGATATGCATCTGAACGTGTTCCTGTTGGAACAATTCAAATGTTCGCAGGTGATAGCGCTCCTCCAGGTTGGGTTTTATGTCATGGTGGGACCATTTCTGGGAACCAATTTCCGGACTATCGAAATGTGGTTGGAACAAGATTTGGCGGTGATTGGAATAATCCTGGAATTCCGGATATGCGCGGCCTTTTTGTTAGAGGAGCTGGTACTGGCAGTCATATTTTAAATAATCGTGGCCAAGACGGCTATGGAAAGGATAGATTAGGTGTAGGATGTGACGGCATGCATGTTGGTGGTGTCCAAGCACAACAAATGTCATATCATAAACATGCTGGTGGATGGGGCGAATATCAACGTCATGAGGCACCGTTCGGAGCATCCGTATATCAAGGTTATTTGGGTACTAGAAAATACGCTGATTGGGATAACGCATCATATTTCACAAATGACGGCTTCGAATTAGGTGGTCACCGCGACGCAACAGGCACTCTTAACCGTGAAGGACTTATCGGATATGAGACTCGTCCATGGAATATATCTTTAAATTATATTATTAAAGTCCATTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94e1bebb3d38258f592e29dca2539fb987e4799ebe2556a97533da97b4d0ba77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6649
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50