Protein

View in Explore
Genbank accession
AHK11869.1 [GenBank]
Protein name
tail fiber repeat family protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MLQVTFDITTETPELTFSNVGIPGPRGLQGIQGEPGKDFKYTDFTPEQLAALVGPQGKEGKEGKEGKQGIKGDTGNTGLTGPVGPKFLYTDFTDDDKNDLRQPLRDEFSQTLADSQAAASQAAASSATAQGASLVTTQDKQAVTQTLATINAVKADIDNIQQSIDQTSIHIDSQAQVVDTQHSDVVSAAGTVNTNLGLVIQYKDEAAVSRQSASQSAQDAQAAAQVAQSALVYEGLWDPSTGVYPTTNNRNGVWKVVGVGTVGGINYQTGQELIWYKDTSSWQLIPSSTLITAINGYRQGDIVLTAADVGALPSTTQLFSGAYGDLSGKPTSFTPSAHTQGWSTITGKPTTATRWPTYAEVTGKPTLFSGKYGDLTGIPTTFPSDWATLTNKPPFATRWPTPGEVGALTVAQADAKYYSPANKPAWADVAGNAYVSASSGDLKVGSNTNLKASRTDKGFLPAQDGTGSSSTSYLGRPDWWFKEAWVNTYRGGAINITDGATLGGTLISNPSSASTYSYQRMPTYATGSKTLLRKFRGGYGDMIWHETVQGGAYRLAIGNEDSTEFLRLEGSDGYIRGHQIYTKGNKPTAADVGALSVGGGVIHGTLELTDSGTSTARTRLTNANGVSYLQVAKADGSAGTLRFSKLNTSNDPLSSIEAFVEANNFKINGHEVYTRGNKPSPADIGALPAQGKAVDSDKLAGFEVNYYVVPSTVVVRNANGDVNTRTINTTLQTQSEIGEDTAGIAFRLKDGLLRFANKTGLINWLGRVNDSTRFLGKTLDEVKTETRAGLIPDTRTVNGKRLNANIVVTQGDVGLGNVANFGNTNSYAGTSTALYATQKAAYDAAAAPRLEAERKRKITHGTAAPSGGADGDIYLQYK
Physico‐chemical
properties
protein length:878 AA
molecular weight: 92792,39400 Da
isoelectric point:5,90440
aromaticity:0,07973
hydropathy:-0,40342

Domains

Domains [InterPro]
DC_1266
STR
7–238
DC_1266 DC_0172 DC_1938
DC_1938
ATT
425–668
DC_1938
AHK11869.1
1 878
Architecture
STR
ATT
STR 7-424 | ATT 425-877 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHK11869.1
1 878
Domain Start End Length (AA) Confidence
N-terminal 1 438 438 0,9735
Central domain 439 637 200 0,2771
C-terminal 638 878 240 0,1764
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-438
Central
439-637
C-terminal
638-878

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CHOED
[NCBI] 		1458716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHK11869.1 [NCBI]
Genbank nucleotide accession
KJ192399.2 [NCBI]
CDS location
range 6388 -> 9024
strand +
CDS
ATGTTACAAGTTACATTTGATATTACTACCGAGACTCCTGAATTGACCTTCTCTAATGTTGGTATTCCGGGTCCTCGGGGTCTTCAAGGTATCCAAGGGGAACCCGGTAAAGACTTTAAATACACAGACTTTACACCTGAACAACTAGCGGCGCTTGTAGGGCCTCAGGGTAAAGAAGGGAAGGAAGGTAAGGAAGGTAAACAAGGAATTAAAGGGGATACAGGTAACACTGGTCTTACTGGCCCTGTAGGTCCTAAATTCCTCTACACAGACTTCACTGATGATGATAAGAATGACTTACGTCAACCTTTACGTGATGAGTTCTCTCAGACTTTAGCGGATTCCCAAGCGGCTGCCAGCCAAGCGGCGGCATCTAGTGCTACAGCTCAAGGGGCCAGTTTAGTAACCACACAGGATAAACAGGCGGTCACTCAGACCTTAGCTACCATCAATGCAGTTAAAGCTGATATTGATAATATCCAACAATCAATTGACCAGACCTCTATTCATATTGATAGTCAGGCGCAGGTTGTGGACACTCAACATTCTGATGTTGTAAGTGCGGCAGGTACAGTAAATACTAACTTAGGATTAGTGATTCAGTATAAAGATGAAGCTGCTGTATCTCGTCAGTCTGCCAGTCAGTCAGCACAGGACGCCCAAGCGGCTGCCCAAGTGGCCCAATCGGCTCTCGTGTATGAAGGTTTATGGGACCCTTCAACAGGTGTATACCCTACAACTAACAACCGAAATGGTGTATGGAAAGTAGTGGGTGTAGGTACTGTAGGTGGTATAAACTACCAAACAGGTCAAGAGTTAATCTGGTATAAAGATACATCTTCATGGCAGCTTATCCCTTCATCTACCTTAATCACTGCTATTAACGGTTACCGTCAAGGTGACATTGTGCTAACAGCGGCTGATGTAGGTGCATTACCTTCAACTACCCAGTTGTTCTCAGGTGCCTATGGGGACCTATCGGGTAAACCTACGTCTTTCACCCCTTCAGCTCATACTCAAGGGTGGAGCACAATTACAGGTAAGCCTACCACGGCTACCCGTTGGCCTACCTATGCGGAAGTTACAGGTAAACCTACGTTATTCTCAGGGAAATATGGGGACCTTACAGGAATCCCTACAACCTTCCCTTCAGATTGGGCTACTTTGACTAACAAGCCACCTTTCGCTACCCGTTGGCCTACCCCGGGAGAAGTTGGGGCCCTAACGGTAGCTCAGGCTGACGCTAAGTACTATAGTCCTGCTAATAAACCAGCATGGGCAGATGTAGCTGGTAATGCTTATGTCAGTGCTTCTAGTGGTGATTTAAAAGTAGGCAGTAACACTAACCTTAAAGCCTCTAGAACTGACAAAGGATTCTTACCTGCACAGGATGGGACTGGTAGTTCATCTACAAGTTACCTAGGGAGACCTGATTGGTGGTTCAAAGAAGCTTGGGTTAATACCTATCGTGGTGGCGCTATTAATATTACAGATGGAGCTACTCTTGGGGGGACTCTGATTTCTAACCCGAGTTCAGCATCTACATACTCTTATCAACGTATGCCCACATATGCAACCGGAAGTAAAACACTCCTCCGTAAGTTCCGAGGTGGTTACGGCGATATGATTTGGCATGAAACTGTCCAAGGCGGCGCATATCGTTTAGCGATTGGTAATGAGGATTCAACTGAGTTTTTAAGACTGGAAGGGTCTGATGGTTATATTAGGGGACATCAGATTTATACAAAAGGTAACAAACCAACTGCTGCTGATGTAGGTGCATTATCTGTAGGAGGAGGGGTCATACATGGGACACTAGAACTTACTGATAGTGGCACCTCTACTGCACGTACACGTCTAACTAATGCTAATGGTGTCTCATATTTACAGGTCGCAAAGGCTGATGGGAGCGCGGGTACTCTCCGTTTCTCAAAGTTAAATACATCTAATGACCCATTAAGTAGCATAGAAGCCTTCGTGGAAGCTAATAACTTCAAAATTAATGGTCACGAAGTGTACACTAGAGGGAATAAGCCAAGCCCCGCTGATATTGGGGCATTACCTGCACAAGGTAAGGCAGTCGATTCAGATAAGTTAGCAGGTTTTGAGGTTAATTATTATGTAGTACCTAGCACTGTAGTTGTACGTAACGCTAATGGGGATGTAAACACACGGACTATTAATACAACCTTACAGACTCAATCGGAAATCGGTGAGGATACCGCAGGTATTGCCTTCCGATTAAAAGATGGCCTCCTTCGGTTTGCCAATAAGACCGGGTTGATTAACTGGTTAGGTCGTGTTAATGACTCCACTAGATTCCTAGGGAAAACCTTGGATGAAGTCAAGACAGAAACACGTGCTGGACTTATCCCTGATACTCGTACTGTGAACGGTAAGCGTCTCAACGCGAACATCGTGGTAACCCAAGGGGATGTAGGGTTAGGCAACGTGGCTAACTTCGGCAACACCAACTCATATGCAGGTACATCAACGGCTCTATATGCAACCCAAAAGGCTGCCTATGATGCTGCTGCTGCTCCTCGATTGGAAGCCGAACGTAAACGTAAAATAACTCACGGAACAGCAGCCCCTTCTGGTGGTGCTGATGGTGATATTTACCTTCAATATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d9733427aa684253a238afdaf5a608cac6d50785497a16b4790adeafb1a47d0d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio anguillarum bacteriophage CHOED of the family Podoviridae, successfully used for phage therapy in aquaculture Romero,J., Gajardo,F., Higuera,G., Castillo,D., Middleboe,M., Garcia,K., Ramirez,C. and Espejo,R. 2014-08-28 — GenBank