Protein

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Genbank accession

CCE26321.1 [GenBank]

Protein name

putative variable tail fibre protein

RBP type

TSP

Evidence RBPdetect

Probability 0,66

Protein sequence

MANLSRIAFVLRTIPNLNSEEITGIYPGELFLVGDKKAIFYKQGDGTVISPSEAASTFLTIEGNLEEISDKAKARENLGIKSAALKESGTDKGQLYSVGDFNSFLEESTIISALDFNTYKFKSNEVIVLAKAAATNIPVGLDLGVNVVINVMATGTSSKGGFIAFVSDLANEKASYVLRCSYGTSSRTFAVESIYTDKHKPNLNDLNVYSKETAKDTFFQISNLFSEIVDDDDKEIARLNLGLGTASVLNKGTAKGNVIVVGDGGLGINDNKVAALKSVIPAFYQLTDDSPDKPEVDKDYGVLSFPISKTLTGYLVLSSDGVLSLGIDGADGVELSKVYLANNLPTLNELKALGTENNLSDIKDKAKARTNLGLGDSATKNVGTETGTVAAGDDSRITGAAQKDKNLKDLTDKSIARTNLELGSAAQKTAQTNITDTTSGSLMQVGAFGLGGSGVPFSGEGKDLIAFLKNAPSGMYRFGDSSSYTNGIPSGQYSDILLMDHGGSNSKSAIAVDFSGQVFAICLRADGTSSGWVTIFSDTDFSNNLLLPIGVPIPYPLATPPKNFLKANGSAFDQVAFPKLLNYYPSGVLPDLRGEFIRGWDDGRNVDTGRNILTNQGDAIRNITGKLNVLSSSDEPFSTADLFKWANEGALDIIRTGFSHSSGGGGGAGGGVSGFTFDASKSGVPTANENRPRNIAFNYIIRAK

Physico‐chemical properties

protein length:	704 AA
molecular weight:	74342,33270 Da
isoelectric point:	5,00629
aromaticity:	0,07955
hydropathy:	-0,15213

Domains

Domains [InterPro]

DC_1977
STR
34–131

DC_1977 DC_1093 DC_1403 IPR051934

DC_2127
STR
425–545

DC_2127 IPR037053

DC_0310
STR
510–704

DC_0310

SSF88874
STR
546–703

SSF88874

IPR011083
ATT
550–597

IPR011083

CCE26321.1

1 704

Architecture

STR

ATT

STR

STR 34-131 | STR 167-290 | STR 355-545 | ATT 546-598 | STR 599-704

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1977	STR	DC_1977	34	131	Novel HMM	DC_1977	Central	Low	Positional only	41 proteins / 41 hits
DC_1093	STR	DC_1093	167	290	Novel HMM	DC_1093	Central	Low	Positional only	18 proteins / 18 hits
DC_1403	STR	DC_1403	355	448	Novel HMM	DC_1403	Central	Low	Positional only	15 proteins / 15 hits
DC_2127	STR	DC_2127	425	545	Novel HMM	DC_2127	Central	Low	Positional only	8 proteins / 8 hits
IPR051934	Unmapped	-	490	629	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
DC_0310	STR	DC_0310	510	704	Novel HMM	DC_0310	Central	Low	Positional only	71 proteins / 71 hits
IPR037053	ATT	IPR037053	546	598	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	546	703	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	550	597	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CCE26321.1

1 704

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	694	694	0,6053
Central domain	695	694	1	0,0159
C-terminal	695	704	9	0,9923

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (9 AA) is still below minimum (10 AA). Sequence may be too short.

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-694

Central
695-694

C-terminal
695-704

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Yersinia phage phiR1-37 [NCBI]	331278	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Yersinia enterocolitica [NCBI]	630	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

CCE26321.1 [NCBI]

Genbank nucleotide accession

AJ972879 [NCBI]

CDS location

range 221499 -> 223613
strand -

CDS

ATGGCAAACTTAAGTAGGATAGCCTTTGTTCTTAGAACTATACCTAACTTAAACTCTGAAGAAATTACCGGAATTTATCCGGGAGAATTATTCTTAGTTGGTGATAAAAAGGCTATATTTTATAAGCAAGGGGATGGAACTGTAATTTCTCCATCTGAAGCAGCAAGTACTTTCTTAACTATTGAAGGTAATTTGGAAGAAATTTCAGATAAAGCAAAAGCTAGAGAAAATCTAGGAATTAAGAGTGCAGCTCTTAAAGAATCGGGTACAGATAAAGGACAGTTATATTCTGTAGGTGATTTTAATAGTTTCTTAGAAGAATCTACTATTATTTCAGCGTTAGACTTCAATACTTATAAATTTAAATCTAATGAAGTTATTGTATTAGCAAAAGCTGCCGCAACCAATATTCCGGTTGGCCTAGACTTAGGCGTTAATGTAGTTATTAATGTAATGGCTACAGGTACTTCCAGTAAAGGTGGTTTTATTGCCTTTGTATCAGACTTAGCTAATGAAAAAGCTTCATATGTTTTAAGATGTTCTTATGGAACATCTTCTAGAACTTTTGCTGTAGAAAGTATTTATACGGATAAACATAAACCTAACTTAAATGATTTGAATGTATATTCAAAAGAAACGGCTAAAGATACCTTCTTCCAAATCTCAAATCTTTTCTCAGAAATTGTAGATGACGATGATAAGGAAATTGCTAGGTTAAATCTAGGTCTTGGAACAGCATCTGTATTAAATAAAGGTACTGCTAAAGGTAATGTAATTGTTGTAGGTGATGGTGGTTTAGGTATAAATGATAATAAAGTTGCTGCGCTTAAATCAGTAATACCCGCTTTCTACCAATTAACTGATGACTCTCCGGATAAACCTGAAGTAGATAAAGATTATGGGGTTCTATCTTTCCCTATATCTAAAACTCTTACAGGGTATTTAGTTTTATCTTCTGATGGCGTATTATCTTTAGGTATTGATGGCGCTGACGGAGTTGAGTTATCCAAGGTATATCTGGCAAATAACTTACCTACTCTTAATGAATTAAAAGCATTAGGTACTGAAAATAATTTATCTGATATTAAAGATAAAGCCAAAGCTAGAACTAATCTAGGTTTAGGTGATTCAGCTACCAAAAATGTTGGTACGGAAACAGGTACAGTTGCTGCAGGTGACGATAGCCGCATTACTGGTGCTGCTCAGAAAGATAAAAACTTAAAAGATCTTACAGATAAATCAATAGCTCGTACTAATCTTGAATTAGGTAGTGCTGCTCAGAAAACTGCTCAAACTAACATTACCGATACCACTTCAGGCAGTTTGATGCAAGTTGGAGCGTTTGGTTTGGGTGGCTCAGGAGTACCTTTTTCTGGTGAGGGTAAAGACTTAATTGCTTTTTTAAAAAATGCTCCTTCCGGTATGTATAGATTTGGTGATTCTTCATCATATACAAATGGAATACCTTCTGGACAATATTCTGATATTCTTTTAATGGATCATGGTGGGTCAAATTCTAAATCTGCAATAGCCGTTGATTTTTCAGGTCAAGTATTTGCTATCTGTTTAAGAGCTGATGGCACTAGTAGCGGATGGGTTACAATATTTTCTGATACAGATTTCTCAAATAATCTCTTACTTCCTATAGGCGTACCAATTCCTTATCCATTAGCAACTCCACCTAAAAACTTTTTGAAAGCTAATGGTAGTGCTTTTGATCAGGTAGCTTTCCCTAAATTATTAAACTATTACCCATCTGGAGTCCTACCTGATCTTCGTGGAGAATTTATCCGTGGTTGGGACGATGGTAGAAATGTAGATACTGGACGAAATATTTTGACCAATCAGGGGGATGCTATTCGAAATATTACTGGTAAATTAAACGTTCTTTCTTCTTCAGATGAACCATTTTCGACAGCGGATTTATTTAAATGGGCAAATGAAGGTGCATTAGATATTATTAGAACAGGATTTTCACATTCCTCTGGTGGGGGTGGTGGAGCTGGTGGGGGAGTTTCAGGTTTCACATTTGATGCATCTAAGAGTGGTGTACCAACAGCTAATGAAAATAGACCACGAAATATTGCATTTAACTATATTATTAGGGCCAAATAA

Genome Context

Tertiary structure

PDB ID

c4e14a0dbdbac52fc40a88305ce7d82375d1c1b52fd6d4a35c6127f9e1878000

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7166

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence