Protein

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Genbank accession
AUR85557.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MPLILHHKDPARIIKHDIYEVEAGTNLLDWLCEQWQSSDEMSDGLSVTVLLNGKPIFESDNENANEGVLDFTIGELDTVSIVNRPAVEAVIIAVVAIVVAVAVSLALAPSLPGDAGSQSESPNNRLQSAQNSFRPGEARPEIFGKVVSYPDFIQPSYFEYVNDLKIVYELGYIGEGFFDIGEVRNGATQFNTIPGSSFQIFEPGEAIPQGLLTINRTADPVDGQVLIAPDDESLEQDRQIDSYVSDGVSNTELTLVEGSTFTLDTELEIGDYLTLSALSGGTLVPFTAQVQNLAVVSERTVITLDSLEVITEIAQGIVLAVTDEDGNRDNYVGYFEIPGNEAEEVWFNWQMPQGLRTESGKQLSIDLEFEIEAIDANDQPTGLIFVKNVTVTDNTLNPLFRTTKFTPAEFPAMIISQYRARVRRLTEQADGAASQQIKMEQFVSVTPYTNLDNSKGTIISWQRRATTFAISTSGNKNNMDVTRRLPTYNRATGVYDVNNLTATRDFADAAAYELIVAAGRDASTVDLAELYAINDGLLHPELGYFDFTFDNKNVGLGERIESICNAARVNPFRDGAVWRFTRDEIKPIRTAMFNRRVTVGNSSKQSWLLQRPDDKDSVALTYVDPDDNVERILYRRIDDSGNIVDDGQGRQALEINLAGCRNFFQAWNRINLEMRRIIYQRRTVNDTTLRDGMIVGLLERVGWVDPNDVTLSSGEILGFSGDVYDTSERFEPVSGQSYVVYITDDQGNTSNSVAVTARTDTEFGFIASGLSGAYLASPSGDQLGSRYFIGTASDLTATDFLVTSRKPQADGSVAIELVEYIPQMYELDNANPPQESLTMPVDIASTAVSNEGEDAVANITVKSDGTITASGGFTADYVPTPATGIGSNFEAMLTQESGNAIGGSAVGVWIPLSSDVEWTLTESGDPTGTASAIASVEVREISFTENVGLSSLVMSAVVGGVVELPATISVSSNSVGASARSSVQFFSNGTWRGVGDFSTSGNYVSSASGIGELYEARATKVSGTTTTGSPLDVWINLGGSAVSWDLVVPGGGFISRTGVIDVEIREVANVSNIDTSQVTLIARTEL
Physico‐chemical
properties
protein length:1086 AA
molecular weight: 117525,02900 Da
isoelectric point:4,27477
aromaticity:0,08103
hydropathy:-0,12799

Domains

Domains [InterPro]
DC_0118
STR
1–671
DC_0118 DC_0808
NF040662
Unmapped
339–826
NF040662
Coil
Unmapped
415–435
Coil
AUR85557.1
1 1086
Architecture
STR
RBD
STR 1-671 | RBD 684-1030 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85557.1
1 1086
Domain Start End Length (AA) Confidence
N-terminal 1 228 228 0,9874
Central domain 229 427 200 0,3267
C-terminal 428 1086 658 0,0263
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-228
Central
229-427
C-terminal
428-1086

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.076.O._10N.286.51.B7
[NCBI] 		2070720 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella
[NCBI] 		22 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85557.1 [NCBI]
Genbank nucleotide accession
MG592452 [NCBI]
CDS location
range 32730 -> 35990
strand +
CDS
ATGCCCCTAATACTGCATCATAAAGATCCAGCCAGAATAATAAAGCATGACATTTATGAGGTTGAGGCAGGAACAAACCTTTTAGATTGGCTGTGCGAGCAATGGCAATCATCCGACGAAATGTCTGACGGTCTTAGCGTCACCGTTCTTCTTAATGGCAAGCCAATATTTGAAAGCGATAACGAAAACGCTAATGAAGGTGTGCTTGATTTTACTATAGGCGAACTTGATACCGTTTCTATTGTTAATCGACCTGCAGTTGAGGCGGTTATTATTGCTGTCGTGGCAATTGTTGTTGCTGTTGCGGTTTCACTTGCATTAGCGCCGTCGTTACCTGGTGACGCTGGCTCGCAATCAGAGTCACCGAACAACCGATTGCAATCAGCTCAGAATAGTTTTAGACCAGGTGAGGCTAGGCCAGAGATATTTGGAAAGGTGGTTAGTTACCCTGACTTTATTCAGCCATCCTATTTTGAGTACGTTAACGATCTTAAAATTGTTTATGAACTCGGATACATCGGCGAGGGTTTTTTTGATATCGGAGAGGTTAGAAACGGGGCAACACAATTCAACACTATACCTGGATCGTCATTTCAAATATTTGAGCCGGGCGAGGCTATACCGCAGGGCCTACTAACAATTAACCGAACAGCAGACCCCGTTGATGGGCAAGTGTTGATTGCGCCAGATGATGAATCACTTGAGCAGGATAGGCAAATAGACTCTTATGTTTCTGATGGTGTGTCAAATACAGAATTAACACTGGTCGAGGGTAGTACGTTTACTCTAGATACTGAATTAGAAATCGGTGATTACTTAACGCTTTCAGCGCTATCAGGCGGAACCCTTGTGCCATTCACTGCACAAGTGCAAAACCTTGCTGTTGTATCTGAGAGAACAGTTATTACTCTTGACTCGCTAGAAGTGATCACAGAAATAGCTCAGGGCATTGTGCTAGCAGTAACTGATGAGGACGGCAATCGAGATAACTATGTTGGTTATTTTGAGATACCGGGTAATGAGGCTGAAGAAGTTTGGTTTAACTGGCAGATGCCTCAAGGGTTAAGAACCGAAAGCGGCAAGCAGTTATCAATTGATTTAGAGTTTGAGATTGAAGCTATTGACGCTAACGATCAACCTACTGGTTTGATATTCGTTAAAAACGTAACGGTAACAGATAACACTTTAAACCCGTTATTTAGAACAACTAAATTTACCCCCGCTGAATTCCCAGCGATGATCATATCTCAATATCGTGCAAGGGTAAGAAGATTAACCGAGCAGGCCGACGGCGCAGCAAGCCAGCAAATCAAGATGGAGCAATTTGTCTCTGTCACGCCTTATACAAATTTGGATAACTCCAAAGGCACTATTATTTCTTGGCAGCGTAGAGCAACCACCTTTGCAATCTCGACTAGTGGCAATAAAAACAACATGGACGTAACCAGACGATTACCAACATATAATCGAGCTACTGGCGTTTATGATGTCAATAACCTTACTGCAACTCGTGACTTTGCCGACGCTGCAGCATATGAGTTAATTGTCGCTGCTGGTCGTGATGCTTCTACCGTTGACCTTGCAGAGCTGTACGCGATTAATGACGGCCTATTGCATCCTGAGCTTGGTTACTTTGATTTCACCTTTGATAACAAGAACGTTGGATTAGGTGAGCGAATAGAATCAATTTGCAATGCAGCTAGGGTTAACCCGTTTCGTGATGGTGCAGTATGGCGCTTTACTCGTGACGAAATAAAACCAATCCGTACAGCAATGTTTAACCGTCGTGTGACTGTTGGTAACTCAAGTAAGCAATCTTGGTTACTTCAGCGCCCTGATGATAAAGACTCGGTGGCGTTAACATATGTCGATCCTGATGATAACGTCGAGCGCATTCTTTATAGACGCATTGATGATAGCGGTAATATTGTTGATGATGGTCAAGGAAGACAGGCGCTAGAAATTAATCTCGCTGGCTGCCGTAACTTCTTTCAGGCGTGGAATAGAATTAACCTTGAAATGCGCAGAATCATCTACCAGCGCAGAACGGTAAACGATACAACCTTGCGTGATGGTATGATTGTTGGCCTGCTTGAGCGTGTTGGCTGGGTTGATCCCAATGATGTTACTTTGTCATCTGGTGAGATACTTGGCTTTAGTGGTGACGTTTACGACACTAGCGAACGCTTCGAGCCTGTTAGCGGTCAAAGCTATGTTGTTTATATTACTGACGACCAAGGTAACACTAGCAACTCAGTGGCCGTAACCGCTCGAACTGATACCGAGTTTGGTTTTATTGCTTCAGGTCTTTCTGGTGCTTATCTTGCCTCGCCAAGCGGTGATCAACTTGGTAGTCGTTATTTTATTGGCACAGCTAGCGACTTAACTGCGACTGACTTTTTAGTGACCTCAAGAAAGCCACAAGCCGATGGAAGTGTGGCTATTGAGTTGGTGGAATACATCCCGCAAATGTATGAGTTAGATAATGCTAACCCGCCACAAGAAAGCCTCACGATGCCAGTTGATATAGCATCTACTGCGGTATCAAACGAAGGCGAAGATGCTGTTGCAAATATTACCGTTAAGTCTGACGGAACAATAACCGCGTCAGGTGGATTTACTGCTGATTATGTTCCAACACCTGCGACAGGGATAGGATCTAACTTCGAGGCAATGCTAACGCAAGAAAGTGGCAATGCAATTGGCGGTTCAGCAGTTGGCGTATGGATACCATTATCTAGCGATGTAGAGTGGACGCTAACTGAAAGCGGCGATCCTACTGGAACAGCTTCAGCAATAGCATCAGTTGAGGTTAGAGAGATATCGTTTACTGAAAATGTCGGCTTATCTAGCCTAGTGATGAGTGCTGTTGTCGGCGGGGTGGTAGAGCTTCCAGCAACAATAAGCGTATCGTCGAATTCAGTTGGAGCTAGCGCAAGGTCTAGCGTGCAATTCTTCTCTAATGGTACTTGGCGAGGCGTCGGGGACTTTTCAACTTCAGGTAATTACGTAAGCTCAGCGTCGGGCATTGGTGAACTGTACGAGGCAAGAGCGACCAAGGTTAGCGGCACCACCACAACAGGTAGCCCGCTAGATGTTTGGATCAACCTTGGCGGCTCTGCTGTATCTTGGGATTTAGTTGTTCCAGGTGGTGGGTTTATATCAAGAACGGGTGTTATCGATGTTGAAATTAGAGAGGTAGCAAACGTTTCTAATATTGACACGTCACAGGTAACGCTAATAGCTCGGACTGAATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3c6bfccfa6c64cf1a0acd31675a7cbb2a3b59b0cd373de4bded7953633e82cf7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2820
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank