Protein

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Genbank accession
AGH07442.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPHPIDYNGTQDDDQIRSIDLVHIEPSIREGLNVIPSLYGKRTSRPLRRYPPVIVTEPYITGSALIPSTLFCHTGQWDASPAVQFAFQWMADGTDISGATLQTWTSSIEYDGKEITCEVRGYNTKGEAYLISTNSITVSIIEPIEINDADWGAVSGISQHALTTVNNTKNVIVTGIGTENAQTVVRSVAYFFTGRSADKREDVNSMYNPVITGLSIQDSDLISNSNTMVVSKKLIQSLEIEPVQQLNIKNPNADMGNAAWTTFGPIEYIVNAHSGDYYNRAWFGGTNVDAAQQNFPYTYQYQDVPVEELWETDIDTGLCNIQILWYQSANASGGDAANMKVEFYDETKNNLLGFDDGAGLVGFPVNIYLRRNFHATVPVGTRYIRVFMEFLLVEGQNNNALLDTISGLIYKGNLPSSRSFGPAFEMWRLNFTRLNSAPYISLKEIEFRDDQGVDQALDGRVISGSEGMGGYAVNAFDDLRDNQYWASENSGIADGTAWIGYDFGTPTEVSEIDITARNGTNAHHIGREFILQGSDDGQFWYDVQVFDDIETFSSDQQKQFNVLQGVMPWTVVGENDPPLGTVLPNYVYKTNESEKHIGNIYTAKRRMNIKEISAMVLNGAYGEIGIARIATTGDRWFIDNEFGELEVHSYTATSTGRYEVTLDKDFEVEVGDLFAVIYTQLNTSTREKIYFDTNYLEGTLNNEAYDMLMKWRSSSETIVENLENLSYNNTRTSMLEVKGTYF
Physico‐chemical
properties
protein length:742 AA
molecular weight: 83039,16440 Da
isoelectric point:4,49002
aromaticity:0,11186
hydropathy:-0,34488

Domains

Domains [InterPro]
G3DSA:2.60.40.2700
RBD
49–135
G3DSA:2.60.40.2700 IPR000421
DC_1007
ATT
50–166
DC_1007 G3DSA:2.60.120.260
IPR007110
STR
51–137
IPR007110 IPR008979
IPR008979
STR
461–545
IPR008979
IPR000421
RBD
471–553
IPR000421
AGH07442.1
1 742
Architecture
ATT
RBD
STR
ATT 49-166 | RBD 435-455 | STR 456-568 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH07442.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 420 420 0,6757
Central domain 421 638 219 0,3489
C-terminal 639 742 103 0,8847
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-420
Central
421-638
C-terminal
639-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage phiCB2047-B
[NCBI] 		754046 Uroviricota > Caudoviricetes > Schitoviridae > Raunefjordenvirus > Raunefjordenvirus CB2047B
Host Sulfitobacter sp. CB2047
[NCBI] 		1525218 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07442.1 [NCBI]
Genbank nucleotide accession
HQ317387 [NCBI]
CDS location
range 71488 -> 73716
strand -
CDS
ATGCCTCATCCCATTGATTATAATGGGACTCAGGATGACGACCAAATCCGTTCTATTGATCTGGTTCACATTGAGCCGTCAATCAGAGAAGGTTTGAATGTCATTCCGTCCCTGTATGGTAAGAGAACATCTCGTCCTCTTCGTAGATACCCACCTGTAATCGTAACAGAGCCATACATTACTGGTTCTGCTTTGATTCCTTCAACGTTGTTCTGCCATACTGGTCAATGGGATGCTTCACCTGCTGTTCAGTTTGCTTTTCAGTGGATGGCAGATGGTACTGATATCTCAGGAGCTACATTACAGACTTGGACTTCATCCATTGAATACGATGGTAAGGAAATCACCTGTGAGGTTCGTGGCTACAATACCAAAGGTGAGGCTTACCTAATCTCAACCAACAGTATTACTGTGAGTATCATTGAACCAATTGAAATCAATGATGCTGATTGGGGTGCTGTATCTGGTATTTCCCAACATGCCCTAACTACAGTCAACAACACCAAGAATGTTATCGTTACTGGTATTGGTACTGAAAATGCACAGACTGTTGTACGTAGTGTTGCTTACTTCTTCACAGGCCGTTCTGCGGATAAAAGAGAAGATGTAAACAGTATGTACAACCCAGTGATTACTGGTTTGAGTATTCAAGATTCTGATCTAATTTCAAACTCTAATACAATGGTAGTGAGCAAGAAGCTCATCCAAAGCCTAGAGATTGAACCAGTACAGCAACTTAATATCAAAAATCCAAATGCTGATATGGGTAATGCTGCTTGGACTACCTTTGGTCCTATTGAATATATCGTTAATGCTCACAGTGGCGACTACTACAATAGAGCTTGGTTTGGTGGTACTAATGTTGACGCTGCTCAACAGAACTTCCCATATACATATCAATACCAAGATGTCCCTGTAGAGGAGCTTTGGGAAACAGACATTGATACTGGTCTGTGTAATATTCAAATTCTTTGGTATCAATCTGCTAATGCTAGTGGTGGCGATGCTGCTAACATGAAAGTAGAATTCTATGATGAAACCAAGAACAACCTTCTAGGTTTTGATGATGGTGCTGGTTTGGTGGGTTTTCCTGTCAATATCTACTTGCGTAGAAACTTCCATGCTACAGTACCCGTAGGTACAAGATATATCCGTGTCTTCATGGAATTCTTGCTTGTCGAGGGCCAGAATAATAATGCTTTGCTCGATACAATTTCGGGCTTGATCTATAAAGGTAATCTACCATCATCTCGTAGTTTTGGTCCTGCATTTGAAATGTGGAGACTGAACTTCACCAGACTAAATTCAGCACCATACATCTCACTTAAAGAAATTGAGTTCAGAGATGATCAGGGTGTTGATCAAGCTTTGGATGGAAGAGTTATCTCTGGTTCTGAAGGTATGGGTGGTTATGCTGTCAATGCTTTTGATGATCTACGTGATAACCAATACTGGGCAAGTGAGAATTCTGGCATTGCTGATGGTACTGCTTGGATTGGTTATGATTTTGGTACACCTACTGAAGTAAGTGAAATTGATATCACAGCCCGCAACGGTACAAACGCTCATCACATTGGTAGAGAGTTTATCCTACAAGGTTCTGATGATGGTCAGTTCTGGTATGATGTACAAGTCTTTGATGACATCGAAACCTTCAGTTCAGATCAACAAAAACAGTTTAATGTTCTTCAAGGTGTTATGCCTTGGACTGTTGTTGGTGAGAATGATCCGCCACTTGGTACTGTTCTTCCTAACTATGTCTACAAAACTAACGAGAGTGAAAAACATATTGGTAATATCTACACAGCCAAACGTCGTATGAATATCAAAGAAATTTCTGCAATGGTACTGAATGGTGCTTATGGGGAAATTGGTATCGCTCGTATCGCAACAACTGGTGATAGGTGGTTTATTGATAATGAATTTGGTGAGCTTGAAGTACACAGCTATACCGCTACCAGCACTGGTAGGTATGAGGTAACTTTAGACAAGGACTTTGAAGTAGAAGTTGGTGACTTGTTTGCTGTTATTTACACCCAGCTAAACACCTCAACTAGAGAAAAAATTTACTTCGATACAAACTATTTAGAAGGTACTCTGAACAACGAAGCTTATGATATGTTAATGAAGTGGCGTTCCTCTTCAGAGACTATTGTAGAAAACCTAGAAAACCTCTCTTATAACAATACACGAACCAGTATGCTTGAGGTCAAGGGTACTTACTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a680738209b2ae84d72f103f312ffc9ed66afe1c015f5f140f9783d0b133471c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6756
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Sulfitobacter phage pCB2047-B Henn,M.R., Buchan,A., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank