Protein

View in Explore
Genbank accession
YP_009790523.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,62
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVGFSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTNPSYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGAAINDVFFFRNRLGFLSGENVIMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSNGILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGGYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHEARDWATNPYISFVGNRAGEQMVIGKQYIFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQRVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88868,47310 Da
isoelectric point:5,65528
aromaticity:0,11139
hydropathy:-0,26498

Domains

Domains [InterPro]
IPR058003
TTP
1–808
IPR058003
YP_009790523.1
1 808
Architecture
TTP
TTP 1-808
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790523.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9920
Central domain 142 340 200 0,2888
C-terminal 341 808 467 0,1640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage KNP
[NCBI] 		2783802 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790523.1 [NCBI]
Genbank nucleotide accession
NC_047827 [NCBI]
CDS location
range 24788 -> 27214
strand +
CDS
ATGGGACTCGTTTCGCAATCCGTCAAGAACCTCAAAGGAGGTATCTCGCAACAACCAGACATCCTTCGGTTCTCCAACCAAGGCGCTCTGCAAATCAACGGGTGGTCCTCGGAGACTCAAGGTCTTCAGAAGCGGCCACCAACCACCTTCACCAAGCGGCTCCAGAACAAGGGTTTCCTCGGCACCAAGCCGCTGGTTCACCTCATCAACCGGGACGCCCAAGAGCAATACTTCGTGGGCTTCTCTGGGACCGGTCTGGCAGTCTGGGACCTGAAGGGCAACAACTACACCGTGCGTGGCTACAACGGTTACGCCAACTGCGCCAACCCTCGGACTGACCTGCGACTCATCACCGTGGCCGACTACACCTTCGTGGTTAACCGGAACACCGTGTGCCAGATGGGATCGACTCTGACCAACCCTTCGTACCCACGGCTGGACGGTCGAGCGATTATCAACGTGCGTGGCGGTCAGTATGGCCGAACCCTGTCGATCACCATCAACGGTGACGGCACTGGGTCAAGTCCTCAAGCGTCCATTAAGATGCCCAACGGTTCCGCTGAGAAGGTGCCCGCTGGTGACCCATACGCTGGCATGAACCAAGTGGACATGACAGATGCCTCATGGATCGCCGCTGAGCTGGCCCGCCAACTGACAGTCTCTCTGGGAGGCTCTGGATGGTCGTTCCAAGCGGGCACCGGGTGGATTCTCATCAATGCCCCTGCCAACGACAACGTGCGTCAGATCGCCACCAAGGACGGTTACGCTGACACCCTGCTCAGTGGGTTCATCTATCAGGTCCAGACCTTCACGAAGCTCCCTGCGAACGCCCCACCGGGTTACCTCGTGGAGATCACTGGTGAGTCTGCCCGTTCGGGTGACAACTACTGGGTCCAATATGACGCCTCTGGGAAGGTCTGGAAGGAGACAGCGAAGCCCAAGATCATCGCAGGGTTCAACAACGCAACGCTCCCACACGCGCTCGTGAGGGCCGCTGACGGGCAGTTCGACTGGACTCCCCTGACGTGGGATGGACGCAACGCTGGTGACGATGACACGAACCCAATGCCGTCCTTCGTGGGCGCTGCGATCAACGACGTGTTCTTCTTCAGGAACCGTTTGGGTTTCCTCTCTGGTGAGAACGTCATCATGTCTCGCACCTCGAAGTATTTCAATTTCTTCCCGAGCAGCGTGGCGACCCTGAGCGATGACGATCCAATCGACGTGGCTATCTCGCACAACCGTATCTCGATCCTGAAGTACGCTGTGCCGTTCTCTGAGCAGCTCCTACTGTGGTCCGACCAAGCTCAGTTCGTTCTGTCGAGCAACGGTATCCTGTCGAGCAAGACCATCGAGCTGGACCTGACCACTGAGTTCGACGTGAGCGATGGTGCCCGTCCCTATGGGATTGGTCGCGGGGTTTACTTCGCAGCTCCACGGGCCTCCTTCACGTCCCTCAAACGGTACTACGCGATTCAGGATGTCTCTGACGTGAAGTCCGCTGAGGATGTCTCTGCGCACGTTCCGAGCTACATCACGAACACCGTCCACGCGATCCACGGGTCTGGTACTGAGAACTTTGTGAGCATCCTTTCGGACGGCTCGCCAAACAAGGTCTTCATCTACAAGTTCCTGTACCTCGACGAGATTCTCCAGCAGCAGTCCTTCAGTCACTGGGAGTTCGGCGATGCGGCCACAACCCGTGTCCTCGCAGCCTCGTGCATTGGCTCCTACTGCTACCTGATGATCGACCGACCAGAGGGCCTGTGCCTTGAGCGCATGGAGTTCACTCAACACACCATTGACTACTCCATCGAGCCTTACCGGACCTACATGGACATGAAGAAGACCATCGTCCTCGGTGGCTACAACATCGACACGAACCTGACTTCGTTCGACGTTCGGACTGCCTACGGTGGAACGCCGGGTCCTGAGTCCACGTTCTACACCATCGACCAGCAAGGGGTTCTCATCGAACACGAGGCGCGGGACTGGGCGACCAATCCGTACATCTCGTTCGTGGGCAACCGGGCTGGCGAGCAGATGGTGATCGGCAAGCAGTACATCTTCCAGTACGAGTTCAGCAAGTTCCTCATCAAGCAGACCGCTGACGATGGGTCCACCTCGACCGAGGACATTGGACGCTTGCAGCTTCGTCGTGCGTGGCTGAACTACGAGGAATCTGGTGCCTTCGAGATCAACGTCAACAACGGCTCCAGCGAGTTCGTCTACGTGATGACTGGTGGTCGCCTCGGGATTCAACGAGTCCTCGGTGAGTTGTCCGTGGGTACTGGTCAGTTCAAGTTCCCTGTGACCGGCAATGCCGTCAACCAACGAGTCACCATCACCAGCTCCAACCCGAACCCACTCAACGTGATCGGATGCGGCTGGGAGGGTAACTACATCCGCCGTTCTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04782880028ce326536ef49cd4f035c781da413189ea17da8b2512e9b3999003
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of two novel autographiviruses infecting bacterium from Pseudomonas fluorescens group Barylski,J., Nowicki,G. and Walkowiak-Nowicka,K. 2017-05-27 — GenBank