Protein

View in Explore
Genbank accession
QBX28170.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MLLTIHDASLRKVAFIDNDKQATLNYFNDTWTRYLETGSSTFDFTVFKKAIISDVGRKRAYNYLNEKAFVSFQYKGKTYLHTIRKVEENEQIIKCYGINLNLELINEYANPYKAPKAMSFKEYCDAMDLLSFTFLKIGVNEVSTQKISAEWEGADTKLNRLLSLAKKFGAEIEFDTHLNADSSIKSFVVNVYHENDDTHQGVGRISPTVLTYGKNLKTLTRTVDKTNIYNMVRPTGRTENGDIVTISGLGSWSVNNDKGEREFYQAGEGLYAPLSMQMYPSAFTSSTTNDQWIRKDMQVESANPEVIRSMAYRELKKNCYPAVTYEAEGFSDLEIGDTVKVYDDGFSPVLLLEMRVSEQSISFTNPKNNKTTFSNAKALENLLSNGIQERLDRMIEDAKPYTVKVSTDNGTAFKNGQGQSVVTPTLMKGNRVINSGWRWVVNGEIKATSPTYIVKAADINQTMVLTIAAWVDNQEVASEQITFLNASDGLKGDKGDPGRDGIAGKNGVGLKSTAITYAPSISGTSAPSNGWTSSVPTVPAGQYLWTKTIWTYTDNTSETGYSVARIGQDGNTGRDGVAGKDGVGIRTTTVVYAGSTSGTVPPTSGWSSQIPSVSPGQYLWTKTTWSYTDNTSETGFSVAKMGETGAKGDKGDTGPRGPQGERGLQGLQGIQGPKGDQGIPGAKGADGRTQYTHIAYADTISGGGFDQTNADKAYIGVYVDFNVADSTNPADYRWTKWRGTDGQNGRDGAQGIPGKPGADGKTPYFHRAWANSADGRDGFSTSDSNNKRYLGTLTDFVEADSQDHTKYKWTALFDNVQVGGVNLLPNAGFYKTTPTATTFTVGGKTHKNTLINKWENPYNGGISNPTSNYHAFVNDTFSSDGPVVEFNESNGLRNWKAINVIIPSKDLMSGAYYFSADLYATGTGTKIWFGFYYYKSDGSRNFHSGQTTVNVSSTGSWQRLGGSIKLNVDVDFSREIRFYIYGYNFSTNSILYLKKPKLENGNIGTAFSLNPSDVDEAINSKADQVLTQEQLNALNEKASIIQAELEAKASADTLDNWIKAYQDFVKANDTARAQAEKDLISASQRVSTIAKDLGELSDRWNFIDTYMSSSNEGLVIGKNDGSSSMMFNPNGRISMFSAGVEVMYISQGVIHIENGIFSKTIQIGRFREEQYHLNADMNVIRYVGG
Physico‐chemical
properties
protein length:1185 AA
molecular weight: 130203,03740 Da
isoelectric point:5,89462
aromaticity:0,10549
hydropathy:-0,50751

Domains

Domains [InterPro]
DC_0255
STR
1–1185
DC_0255
IPR007119
Unmapped
61–373
IPR007119 IPR050149
IPR010572
ENZ
137–377
IPR010572 IPR008160
G3DSA:1.20.5.320
STR
657–713
G3DSA:1.20.5.320
QBX28170.1
1 1185
Architecture
STR
STR 1-1185
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan444
[NCBI] 		2548170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pseudoporcinus
[NCBI] 		361101 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX28170.1 [NCBI]
Genbank nucleotide accession
MK448940.1 [NCBI]
CDS location
range 28420 -> 31977
strand +
CDS
ATGTTATTGACAATTCATGACGCCAGCTTGAGAAAGGTTGCTTTTATTGATAATGATAAACAGGCTACGTTGAATTACTTTAATGATACATGGACTAGGTACCTTGAAACAGGTTCTAGTACCTTTGATTTCACCGTATTCAAAAAGGCTATCATCTCAGATGTTGGGCGAAAACGTGCCTACAACTACTTGAATGAGAAAGCCTTTGTATCATTTCAGTACAAGGGTAAGACTTATCTGCATACTATCCGAAAAGTTGAGGAGAATGAGCAGATTATCAAGTGTTACGGTATCAACTTGAACCTTGAGCTTATCAATGAGTATGCCAATCCATATAAAGCGCCAAAGGCAATGAGTTTCAAAGAGTATTGTGACGCTATGGACTTGCTAAGCTTTACATTCTTGAAAATTGGGGTCAACGAGGTTTCTACTCAAAAAATTTCTGCTGAGTGGGAGGGAGCAGATACCAAGCTGAACCGTCTACTTAGCTTAGCTAAGAAGTTTGGGGCAGAAATTGAATTTGACACCCATCTTAACGCTGATAGTTCTATCAAGTCCTTTGTGGTCAATGTCTATCACGAAAACGACGACACCCACCAAGGAGTGGGGCGTATTAGTCCAACTGTCTTGACATACGGAAAGAACCTAAAAACCTTAACTAGAACGGTAGATAAAACAAACATCTATAACATGGTTAGGCCTACTGGTAGAACAGAAAACGGTGATATTGTCACCATCTCTGGCCTCGGTTCTTGGTCTGTGAATAACGACAAGGGAGAACGTGAATTTTATCAAGCAGGAGAGGGGCTATATGCTCCTCTTTCTATGCAGATGTATCCATCAGCGTTTACTAGCTCTACGACTAATGACCAGTGGATAAGAAAGGATATGCAAGTAGAAAGCGCAAATCCTGAGGTTATCCGCTCCATGGCCTACCGTGAACTCAAAAAGAATTGTTATCCCGCTGTAACTTATGAGGCTGAGGGTTTTTCTGACCTTGAAATAGGGGACACCGTAAAGGTTTATGATGACGGCTTTAGCCCTGTACTCTTACTTGAGATGAGGGTGTCTGAGCAATCTATCAGTTTTACCAACCCAAAGAACAACAAGACTACTTTCTCAAACGCCAAGGCTCTTGAAAATCTTTTGTCAAACGGTATCCAGGAACGCCTAGACCGTATGATAGAAGACGCTAAGCCTTACACCGTGAAAGTCTCTACAGATAACGGTACAGCGTTTAAGAATGGGCAAGGTCAGTCAGTTGTGACCCCTACTTTGATGAAAGGTAATAGGGTCATCAATAGTGGCTGGCGTTGGGTTGTTAATGGCGAAATTAAGGCTACAAGCCCTACCTACATTGTCAAAGCTGCTGACATCAACCAGACAATGGTTCTGACAATCGCTGCATGGGTCGATAATCAAGAAGTAGCGTCTGAACAGATTACTTTCTTGAATGCCTCTGATGGTCTCAAGGGGGATAAAGGAGACCCAGGGCGTGACGGTATTGCAGGTAAGAACGGTGTGGGTTTGAAATCTACAGCTATTACCTATGCACCGTCAATATCAGGGACAAGCGCCCCTAGTAATGGCTGGACTAGCTCAGTTCCAACGGTACCAGCTGGACAATATCTGTGGACTAAGACTATCTGGACATACACTGACAACACTTCTGAGACAGGCTACTCAGTGGCTAGAATTGGCCAAGATGGTAACACTGGTAGAGATGGAGTAGCTGGCAAAGATGGTGTAGGTATCCGAACAACTACAGTAGTCTATGCTGGTTCTACATCAGGAACCGTCCCACCTACAAGCGGTTGGTCTTCTCAAATTCCTAGCGTGTCCCCTGGTCAGTACCTCTGGACCAAAACTACATGGAGCTACACGGATAATACTAGTGAGACTGGTTTTTCTGTGGCAAAAATGGGAGAAACTGGAGCCAAGGGTGACAAAGGCGATACTGGCCCCCGTGGACCTCAAGGAGAGCGTGGGCTACAAGGTCTGCAAGGTATTCAAGGTCCCAAAGGTGACCAAGGTATCCCTGGAGCTAAGGGAGCAGATGGAAGAACTCAGTATACACACATTGCTTATGCTGATACTATTTCAGGAGGTGGATTTGACCAGACCAACGCAGATAAAGCTTATATAGGTGTCTATGTTGATTTCAACGTCGCAGATAGTACCAACCCTGCTGATTACCGCTGGACTAAATGGAGAGGTACAGATGGACAAAACGGTAGAGATGGCGCTCAAGGAATACCAGGTAAGCCTGGTGCTGACGGAAAAACACCTTACTTTCACCGTGCATGGGCTAACTCTGCTGATGGCCGTGACGGTTTCAGTACCTCAGATAGCAATAATAAACGTTATCTAGGTACATTAACCGATTTTGTTGAGGCAGACAGTCAAGACCACACTAAGTACAAGTGGACAGCTCTTTTTGATAATGTGCAGGTTGGGGGAGTGAACCTTTTACCTAATGCAGGTTTTTATAAAACCACTCCCACAGCAACAACTTTCACAGTTGGAGGCAAAACTCATAAAAATACCCTTATCAATAAATGGGAAAATCCATATAATGGGGGAATTTCAAATCCAACTAGTAATTACCATGCTTTTGTCAATGATACATTTTCCTCTGATGGTCCAGTAGTTGAATTTAACGAGAGTAACGGCTTACGAAATTGGAAAGCTATCAATGTTATCATCCCTAGTAAAGATTTAATGTCAGGTGCATATTATTTTTCCGCCGATTTATACGCAACAGGTACAGGTACTAAGATTTGGTTTGGTTTCTATTATTACAAAAGTGATGGTAGCCGAAATTTTCACTCAGGACAAACCACGGTAAATGTTTCTAGTACAGGTAGTTGGCAACGTTTAGGAGGCTCTATTAAATTAAACGTTGATGTTGATTTTAGTAGAGAAATCAGGTTCTATATTTACGGTTATAATTTCTCTACAAATTCAATACTGTACCTAAAGAAGCCTAAGTTAGAAAACGGGAATATTGGTACTGCATTTAGCTTAAATCCATCAGATGTAGACGAGGCTATAAATTCCAAAGCTGACCAAGTTCTCACTCAAGAGCAGTTGAACGCTCTGAATGAAAAAGCTAGTATTATCCAAGCTGAGCTAGAGGCTAAGGCTAGTGCTGATACATTGGACAACTGGATTAAGGCTTATCAGGACTTTGTCAAAGCTAATGACACGGCTAGGGCACAGGCTGAAAAGGATTTGATTTCAGCTAGCCAACGTGTCTCTACCATTGCTAAAGACCTTGGAGAACTTTCTGACCGTTGGAATTTCATTGATACTTACATGAGTTCCTCAAATGAGGGGCTGGTTATTGGTAAGAATGATGGTAGCTCAAGCATGATGTTCAACCCTAACGGTCGTATATCAATGTTTTCAGCAGGTGTGGAGGTCATGTATATCTCTCAAGGTGTTATCCACATTGAAAATGGTATTTTCTCTAAGACTATCCAAATTGGACGCTTTAGAGAAGAACAGTACCATCTCAACGCTGACATGAATGTCATTAGATATGTAGGAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b0b651afb1d448c40c80824dee1cd3d1db3484f2f628c786529d6bd247df8b1f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2904
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank