Protein

View in Explore
Genbank accession
UOL48385.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTVFLIGNKGGEDPPRAAVESPDSLASISYANILDLCSEGEIKGLVKGLQSVFLNETPVQNADGSNNYSSMQIQYRLGTQDQEYLPGFPAVENERQVNFPLKANSPFVQALTNNQLSGVRVLLAVPRLFYQNPTSGDTTGTRVEYSISLKTGDGAFVEVVKGAFDGKTTTQYERTHRIDLPKSSSGWTLRVDRQTADTSPGATNATTVVSYTEVIDRKLRYPNSAIFGMKFDASQFSQTPTRAYELEGIILRVPANYDPVTRTYTGVWNGTFKLAYSNNPAWIYYDLVLNDRYGLGHLIKQYQVDRYELYRIAQYCDQLVSDGKGGTEPRFTCNLYLQQRADALRVIQDLAAIFRGMAYWGGGMVTVTSDMPEDPQYTYTNANVLDGKFEYSGTGRKTRYSICLVSWNDPKDFYRAKVEYVEDSETLRLFGHRQTEATAIGCTSQSQAQRLGRWMLLTNKMETETVNFTVGLDGTLVRPGRIVRIANNDRAGRRIGGRLRSATVNQLVLDDDVTVYTGDEITVIMPNGVAVTRVVAGVGRPVTWDGTSITWDNGTVTWDLESYSQDVQQVTLSQDLPSIPTMHSIWAVDSTTLATQLFRILTISEDFQGTNMNFKVTATLHIPGKFSSVDDGTRLELPPVTIIPPSIQVPVKNISVISDYAISQGLVQTTMTATWDPAPNAVAYEMQWKYNNGNWIYGGRVGTTSIDVKGILAGRYQVRVQAFNSMGLGSVWTNSVEFQLAGRTDPPPSVSYFTSDKLVMGIKVNWGFPATLDIETMQRSELWYSLTTNLNSATKQGDYAYPANSATMMGLSNGAGFYFWIRLVDKIGNEGPFVGPLHGITETNPDLILEYLTGEITKTQLSQELLTFIETAADLSGVNSRIDNVIQVQNNDRSTFTQQINTATSVAGSAQTSANNAAQAAQAASDLAGGKGKVLTQNATPAAADQLPQNLWIDTNGGANTPKRWSGSAWVAVTDKAATDAAAAATAAAGVANQASATAQTAMSTLATLDGELDATYTIKTQVTQDGQRYLAGIGVGVTAQPGQPPVSQVLITADRFAVLTSTAGGTVSAPFVVNNGQVFINDAFISKLTVQNALVGATLRSVAEAAPGLPLLYLNFQTGDFVSRGVGNGYRVEQNNSFWRLYSDSFASPLVELGVLT
Physico‐chemical
properties
protein length:1158 AA
molecular weight: 125934,63030 Da
isoelectric point:5,11468
aromaticity:0,09154
hydropathy:-0,20907

Domains

Domains [InterPro]
DC_0014
STR
1–1154
DC_0014
IPR053171
Unmapped
6–878
IPR053171 IPR015406
IPR055385
ATT
91–217
IPR055385 IPR032876 IPR003961
IPR013783
STR
665–826
IPR013783
IPR036116
STR
668–739
IPR036116
IPR003961
STR
669–739
IPR003961
UOL48385.1
1 1158
Architecture
STR
ATT
STR
ATT
STR
STR 1-90 | ATT 91-217 | STR 218-338 | ATT 339-493 | STR 494-1154 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOL48385.1
1 1158
Domain Start End Length (AA) Confidence
N-terminal 1 535 535 0,9280
Central domain 536 940 406 0,0411
C-terminal 941 1158 217 0,1340
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-535
Central
536-940
C-terminal
941-1158

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Almagne
[NCBI] 		2928829 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOL48385.1 [NCBI]
Genbank nucleotide accession
OM982619.1 [NCBI]
CDS location
range 22501 -> 25977
strand +
CDS
ATGACAGTTTTCCTGATTGGTAACAAGGGTGGCGAAGATCCACCGCGCGCTGCTGTTGAATCCCCCGACAGCTTGGCCAGCATCTCGTATGCCAACATCCTCGACCTTTGTAGTGAGGGTGAGATTAAGGGACTGGTTAAAGGCTTGCAGTCAGTCTTTTTGAACGAGACCCCGGTTCAAAATGCTGATGGCTCCAATAACTACAGCAGTATGCAAATTCAGTACCGACTCGGAACTCAGGATCAGGAGTACTTGCCTGGCTTCCCTGCGGTAGAAAACGAACGTCAGGTAAATTTTCCCCTAAAAGCCAACTCACCTTTTGTCCAAGCCCTAACTAACAATCAGCTTTCGGGTGTCAGAGTCTTGCTGGCAGTTCCCCGGCTTTTTTACCAAAACCCCACATCGGGTGATACCACAGGTACTCGGGTTGAGTACAGTATCAGCCTGAAAACCGGCGACGGGGCTTTTGTTGAGGTGGTTAAGGGGGCTTTTGACGGTAAAACGACTACTCAGTACGAAAGAACTCACCGGATTGATTTGCCTAAATCCTCTTCTGGGTGGACCCTTAGGGTAGACCGTCAGACGGCTGACACCTCACCCGGGGCCACGAACGCTACAACTGTGGTGTCTTACACGGAGGTTATTGACCGCAAGTTGCGTTATCCAAATAGCGCCATCTTCGGTATGAAGTTTGACGCTTCTCAGTTCAGCCAAACCCCAACCCGGGCTTATGAATTGGAGGGCATAATCCTACGGGTTCCCGCTAATTACGACCCAGTAACCAGAACTTACACAGGTGTGTGGAATGGCACGTTTAAGTTGGCCTACAGCAACAACCCTGCCTGGATCTATTACGACCTGGTGCTAAACGATCGGTATGGCCTCGGACACTTGATTAAGCAGTATCAGGTTGACCGCTATGAACTCTATCGCATTGCCCAGTACTGCGATCAGTTGGTGTCTGATGGTAAAGGTGGAACAGAACCCCGTTTCACTTGCAACCTTTATTTGCAACAACGGGCGGATGCCTTGCGAGTTATTCAGGATTTGGCCGCAATCTTCCGGGGCATGGCGTATTGGGGTGGGGGCATGGTCACGGTTACCTCGGACATGCCAGAAGATCCCCAGTATACCTACACCAATGCAAACGTGCTGGACGGCAAGTTCGAGTACAGCGGTACGGGTCGCAAGACTCGGTATAGCATCTGCTTAGTGTCCTGGAACGACCCTAAGGACTTCTATCGGGCCAAAGTCGAGTACGTAGAAGACTCCGAGACGTTGCGTCTCTTCGGCCACCGTCAAACCGAGGCTACAGCCATTGGTTGCACCTCCCAGTCTCAGGCCCAACGCCTGGGTCGCTGGATGCTATTGACCAACAAGATGGAAACCGAAACGGTTAACTTCACGGTCGGCCTGGATGGCACTCTGGTGCGTCCTGGCAGGATTGTTCGTATCGCTAACAATGACCGAGCCGGACGCCGCATCGGGGGGCGCCTCAGGAGCGCTACGGTTAACCAGCTGGTGCTTGACGACGATGTAACCGTCTACACCGGCGACGAGATTACGGTCATTATGCCGAATGGTGTCGCGGTTACTCGTGTGGTCGCGGGGGTGGGTCGCCCGGTTACCTGGGATGGAACATCGATCACCTGGGATAACGGAACCGTTACTTGGGACCTTGAATCCTACTCCCAGGATGTTCAGCAAGTTACCCTGAGCCAGGACCTGCCGAGTATCCCCACGATGCATTCCATTTGGGCGGTCGACTCGACCACACTGGCTACCCAGCTGTTCCGTATCCTGACAATCTCTGAGGATTTTCAGGGCACCAACATGAACTTCAAGGTCACTGCCACTCTGCATATACCCGGCAAGTTTTCATCAGTCGATGATGGGACTCGGCTGGAACTTCCGCCAGTAACTATCATTCCCCCAAGTATTCAAGTTCCGGTTAAGAACATTAGTGTAATTTCAGACTATGCCATTAGCCAGGGATTAGTCCAGACTACCATGACCGCTACTTGGGATCCTGCTCCTAACGCGGTTGCTTACGAGATGCAGTGGAAGTACAACAACGGCAACTGGATCTATGGGGGCCGGGTAGGTACTACATCTATCGACGTGAAAGGTATCCTTGCGGGCCGTTATCAGGTTCGAGTCCAGGCGTTTAACTCAATGGGTCTCGGATCAGTGTGGACTAATTCCGTCGAGTTTCAATTAGCGGGTAGAACTGATCCGCCCCCTTCAGTTTCTTACTTTACCTCAGATAAGCTGGTAATGGGGATCAAGGTTAATTGGGGATTCCCGGCCACACTTGACATAGAAACTATGCAGAGGTCGGAGCTTTGGTACTCACTTACTACAAACCTGAATTCTGCTACCAAGCAGGGGGACTACGCTTATCCGGCTAATAGTGCCACAATGATGGGACTTTCTAATGGGGCGGGGTTCTACTTTTGGATTAGGCTTGTAGACAAGATAGGTAATGAAGGCCCCTTTGTGGGCCCTCTTCATGGAATCACGGAAACTAACCCAGACCTGATTCTTGAGTACCTGACCGGCGAGATTACCAAAACCCAGCTGTCTCAGGAACTGCTGACATTTATCGAAACCGCCGCTGACCTCAGTGGGGTTAACTCGCGAATCGATAATGTCATTCAGGTTCAGAACAACGACCGCAGTACCTTCACCCAGCAAATCAACACCGCGACTTCGGTAGCGGGTAGCGCCCAGACCAGTGCTAACAACGCCGCTCAGGCAGCCCAGGCAGCTTCTGACTTGGCTGGCGGTAAGGGTAAGGTCCTGACCCAGAACGCCACTCCAGCGGCTGCTGACCAGTTACCCCAGAACTTGTGGATCGATACTAACGGTGGGGCTAACACCCCTAAGCGTTGGAGTGGGTCCGCATGGGTGGCTGTAACCGATAAGGCGGCTACGGATGCAGCGGCGGCTGCTACTGCGGCGGCAGGGGTTGCTAATCAGGCCTCAGCGACCGCACAGACGGCCATGTCCACGCTTGCCACACTGGATGGGGAGTTGGATGCCACGTACACGATCAAGACTCAGGTGACCCAGGATGGTCAACGGTATCTAGCCGGTATTGGCGTAGGGGTTACGGCTCAGCCAGGCCAGCCGCCCGTCAGTCAGGTTCTGATCACGGCGGATCGTTTTGCGGTGCTGACCAGCACAGCGGGGGGAACAGTGTCGGCCCCATTCGTGGTCAATAATGGCCAGGTGTTCATCAACGACGCGTTCATATCGAAACTGACGGTTCAAAACGCACTCGTTGGGGCTACCCTAAGGTCTGTAGCTGAGGCGGCACCAGGCTTGCCCCTCTTGTACCTAAACTTTCAAACGGGTGACTTTGTTAGCCGGGGGGTTGGTAATGGCTATCGGGTTGAACAGAATAACAGTTTCTGGAGACTGTACTCTGACAGTTTTGCTAGTCCGTTGGTAGAATTAGGAGTGCTTACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
63d54fce2301aa37ffdf63b22c935825e7855e37e3ce53a6429c367167dc7cb2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50