Protein

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Genbank accession
ACB72562.1 [GenBank]
Protein name
putative adsorption protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MKSKPVSVNVTANGLALSNFRQEFEKDDTEVRSLIQQKADQILLSVDQKIRYTTYTVSASSPWDFNLTKNIYGNWFVKGNPNGEYFYNGPTDKQGKKLITPWVYVKSRGSADGTRVTVTVWKDDSSTQYQRMWCGDHWTPWVMLPNSQNLISAINLSPDSVKISGKNIELNGDTTINGQLNLLPTDQREIDQSVQGVHNAWHWRDANVFAGSGGLQLRSTIVSQRYSDNVQIGGLRKGSSAAITTLAPTYLKFTVYPSWNDVVNNFSNQLARTYIDAGRIETDDAFLGNLRIVGHHIRPVDDKFVIVSNHAGTNFDSNGSVGFQVYGGVGLGQNTIYTTSRDLYIQNGNAVTKLGQSYSSAGKTTIHAQKLVSQEANTVSSRLSVKTAITKVTYDRALMAVQNTDMYDYRYTTDDTGQHYVSGIIDDIHDKPEYNMDPMLINKERTARIDANLLGYHHVILQEILKRLDKLEAK
Physico‐chemical
properties
protein length:474 AA
molecular weight: 53044,68640 Da
isoelectric point:8,29059
aromaticity:0,09283
hydropathy:-0,48439

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACB72562.1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 189 189 0,8112
Central domain 190 388 200 0,4851
C-terminal 389 474 85 0,9846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-189
Central
190-388
C-terminal
389-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage JCL1032
[NCBI] 		37105 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus delbrueckii subsp. lactis
[NCBI] 		29397 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACB72562.1 [NCBI]
Genbank nucleotide accession
EU409559 [NCBI]
CDS location
range 21165 -> 22589
strand +
CDS
ATGAAAAGCAAACCGGTTTCGGTCAATGTTACAGCAAACGGCTTAGCTCTTAGCAACTTCCGGCAAGAATTCGAAAAAGATGACACGGAAGTCCGCTCTTTGATTCAGCAAAAAGCAGATCAGATTCTGTTAAGTGTTGACCAAAAGATTCGATATACCACTTACACTGTGTCTGCATCTAGTCCATGGGACTTTAACCTTACCAAGAACATTTACGGCAACTGGTTCGTAAAAGGCAATCCTAATGGCGAATATTTCTACAATGGGCCGACCGATAAACAGGGGAAAAAACTAATAACTCCATGGGTGTACGTTAAATCTCGTGGGTCAGCCGATGGTACTAGGGTTACTGTAACAGTATGGAAGGACGATAGCTCAACGCAATATCAGCGCATGTGGTGTGGAGACCATTGGACGCCATGGGTAATGCTTCCTAATAGCCAAAACCTTATCTCCGCTATCAACCTCAGCCCAGATAGCGTAAAGATCAGTGGTAAAAACATCGAACTGAATGGTGATACTACAATTAATGGTCAACTGAACTTATTGCCTACTGACCAAAGAGAAATCGATCAAAGTGTCCAGGGGGTTCATAATGCTTGGCATTGGCGGGATGCAAACGTGTTTGCCGGGAGTGGTGGCCTTCAACTACGGTCAACGATTGTTTCACAGAGATACAGTGACAATGTGCAAATCGGCGGACTAAGAAAAGGTTCGTCCGCCGCTATAACAACACTTGCTCCTACATATTTGAAGTTTACTGTATATCCTTCATGGAACGATGTCGTAAACAACTTTTCCAATCAATTAGCTAGAACCTATATTGATGCTGGTAGAATTGAAACGGATGACGCCTTTTTAGGTAATTTACGTATCGTAGGCCATCATATCAGACCGGTCGATGATAAATTTGTGATTGTATCTAACCATGCAGGTACAAACTTTGATAGTAACGGCTCTGTTGGCTTCCAGGTCTATGGTGGTGTCGGCTTGGGACAGAACACAATTTACACGACATCTCGTGACCTTTATATCCAGAATGGCAACGCTGTCACAAAATTGGGGCAATCTTACTCAAGCGCCGGTAAGACTACTATTCACGCTCAGAAGCTCGTTTCTCAAGAAGCAAACACGGTATCATCTCGTCTTTCAGTTAAGACGGCAATCACCAAGGTGACCTATGACCGTGCGCTTATGGCCGTTCAAAACACTGACATGTACGACTACCGCTATACCACAGATGACACTGGACAGCACTATGTTTCCGGGATTATCGATGACATTCACGATAAGCCAGAGTACAACATGGATCCGATGCTGATTAACAAAGAACGCACTGCCAGAATTGACGCAAACTTGCTGGGCTATCACCATGTAATATTGCAAGAAATTTTAAAGAGATTAGACAAGCTAGAGGCAAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cd391b004afd00f1b126079dacb54954dd3b1553fb54e9c48d654f7b15c430f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50