Protein

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Genbank accession
XUL00287.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLNGVFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTAHVRFFDGNSRERGIIYAPANDGLTTQVLNIRVQDYAAGSESIYAFSGSGLFISPEVSAHKSISSPQILTDKVITNGKKAGDYDIYSLANNTPLAESETAINHLRVMRNAVGSGIFHEVKDNDGITWYAGDGLDAYLWSFTWSGGLKAGHSISVGTPGGNKGYSELGTASISLGDNDTGLKWHQDGYFYTVNNGTRTFLYSPESTVSLRKMVMGYSVNGNDLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGRNNSSTLMFRGNTTGYSSVDNMDIKVWGNTFVDPSGGIRKNIMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGDRGVHTTGEISSGAVNALRIWNADYGAIFRRSEGSLHIIPTAYGEGKDGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFVGHGAGAGGYDIQYAQAAPIFQEIDDDAVSKYYPIVKQKFLNGKSVWSLGTEIESGTFVLHHIKEDGSQGHTSRFNQDGTVNFPDNVLVGGGEAAIARNGNIFSDIWKTFTSAGDITNIRDAIATRVAKEGDTMTGRLTLKTNSDAVVIDYPADEAGYVKGKKGGADNWYVGNGGADNGLAFWSFQSQGGININPNGEVILAPQGVAMFNINRDRIHMNGSNWIAHKSGAWGDQWGLEAPYFLDFGSVGEDSYYPIIKGRSVISGQGYTTSVDLGIRRTPQAWGQAIIRVGNAEGADGPVGVFEFHSSGRFYSPNMVQTPAIGVGTDNGLGAPSIAIGDDDTGLSHGGDGRINMVANGIHIANWGAGYQSHPGLWDSNGAFWTEAGRAIVSHGHLVQANDSYSTYVRDVYVRSDIRVKKNLVKFENASEKLSKINGYTYMQKRGTDEEGNQKWEPNAGLIAQEVQAILPELVEGDLDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1101 AA
molecular weight: 118176,58050 Da
isoelectric point:5,41388
aromaticity:0,09355
hydropathy:-0,32289

Domains

Domains [InterPro]
DC_0538
STR
1–683
DC_0538 G3DSA:6.20.80.10 IPR030392
DC_0339
STR
615–1043
DC_0339 Coil
IPR030392
CHP
991–1050
IPR030392
DC_2193
RBD
1025–1101
DC_2193
XUL00287.1
1 1101
Architecture
STR
RBD
STR 1-1043 | RBD 1044-1101
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUL00287.1
1 1101
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,2363
Central domain 213 442 231 0,3963
C-terminal 443 1101 658 0,7082
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-442
C-terminal
443-1101

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LF82-1
[NCBI] 		3424138 Viruses >
Host Escherichia coli LF82
[NCBI] 		591946 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUL00287.1 [NCBI]
Genbank nucleotide accession
PV648359 [NCBI]
CDS location
range 59208 -> 62513
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTAGGTTTTGCTAAAGGTGGTAGTATTGACGGGAATGTTATTCATACTGGCAATTACAACCAAACTGGTGATTATACTTTAAATGGCGTCTTCACACAGACGGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGCGATATTATTGCCGCCGGGCAGATTATGACTGAAGGCGGAGAACTTATTACAAAAAGTTCAGGTACAGCACATGTTCGTTTTTTCGATGGCAATAGTCGCGAACGTGGAATCATTTATGCCCCGGCTAATGATGGTTTAACTACACAAGTACTTAATATCAGGGTTCAAGACTACGCTGCTGGTAGCGAAAGCATTTATGCATTTTCAGGCAGTGGCCTATTTATTTCACCTGAAGTATCAGCACATAAATCTATTTCGTCTCCACAAATTCTGACCGACAAAGTTATTACAAACGGGAAGAAGGCAGGAGATTATGATATCTATTCATTAGCAAATAACACTCCATTGGCAGAAAGCGAAACGGCTATTAACCACCTCCGTGTTATGCGAAATGCCGTAGGATCTGGTATATTCCATGAAGTTAAAGATAACGACGGGATAACCTGGTACGCCGGTGACGGGTTAGATGCCTATCTTTGGTCGTTTACCTGGTCCGGTGGATTGAAAGCAGGCCATTCTATTTCTGTTGGTACTCCTGGTGGCAATAAAGGATACTCTGAATTAGGGACTGCTTCAATTTCTCTTGGCGATAATGATACCGGGCTAAAATGGCATCAGGACGGATATTTCTATACAGTAAACAACGGAACAAGAACTTTCCTTTACAGCCCTGAATCAACTGTAAGCCTTAGAAAAATGGTCATGGGTTATTCTGTAAACGGCAACGATTTAACTACGCCGCCAACAGAAAACTATGCTTTGGCTACTGTCGTGACATATCACGATAATAACGCGTTTGGAGATGGCCAGACTCTTTTAGGATATTATCAAGGCGGTAATTATCATCACTATTTCCGCGGTAAAGGTACTACAAACATTAATACTCACGGCGGTTTGTTGGTTACTCCTGGTAATATTGATGTTATTGGCGGTTCTGTTAATATAGATGGTAGAAATAATTCTTCTACACTAATGTTTAGAGGCAACACAACAGGATACAGCTCGGTTGATAATATGGATATTAAAGTTTGGGGTAATACGTTTGTTGATCCAAGCGGAGGTATCCGTAAAAACATTATGGAAATTTCTGATGCAACTAGCTGGATGAGCTATATTCAAAGACTTACTACTGGCGAAGTAGAAATGAACGTTAATGGTTCATTTGAATCATCTGGTGTTACTGCTGGAGATAGAGGAGTTCACACAACAGGTGAAATTTCATCTGGAGCAGTGAATGCTCTTCGTATTTGGAACGCAGATTATGGAGCCATTTTTAGACGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCTTATGGCGAAGGCAAAGATGGCGATATTGGTCCACTTCGCCCATTTAGTATGGCTTTAGATACTGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCTGCTAACGGTTATATTAAATTTGTTGGTCATGGAGCGGGTGCCGGCGGTTATGACATTCAATATGCTCAAGCGGCTCCTATTTTCCAGGAAATTGATGATGATGCTGTAAGCAAATATTATCCTATTGTTAAACAGAAGTTTTTAAACGGTAAATCTGTTTGGTCTTTAGGTACCGAAATTGAATCAGGTACATTTGTTTTACACCATATCAAAGAAGATGGATCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACCGTTAACTTCCCGGATAACGTTCTGGTCGGCGGGGGCGAAGCTGCTATTGCTCGTAATGGTAATATTTTCTCGGATATTTGGAAAACGTTTACTTCAGCAGGAGACATTACAAATATTCGCGATGCAATAGCTACTCGTGTTGCTAAAGAAGGCGATACGATGACAGGTCGTTTAACTCTTAAAACCAACTCAGATGCTGTTGTTATTGATTATCCGGCAGATGAAGCGGGTTATGTTAAGGGTAAAAAAGGTGGTGCTGATAACTGGTATGTCGGTAACGGTGGTGCTGATAATGGTTTAGCCTTCTGGAGCTTCCAATCCCAAGGCGGTATTAATATTAACCCTAATGGCGAGGTTATTTTAGCCCCACAAGGTGTTGCAATGTTCAATATAAACCGCGACCGTATTCATATGAATGGTTCCAACTGGATTGCACATAAATCTGGTGCATGGGGCGACCAATGGGGCTTAGAAGCACCTTATTTCCTTGATTTTGGTAGCGTTGGCGAAGACAGTTATTATCCTATCATTAAAGGCAGGTCTGTAATTAGTGGTCAAGGATATACTACTTCTGTTGACCTTGGTATTAGACGTACACCTCAAGCATGGGGACAAGCGATAATTCGAGTTGGTAATGCCGAAGGCGCTGACGGTCCTGTGGGTGTTTTTGAATTCCATTCGTCTGGACGATTCTATAGCCCTAATATGGTTCAAACTCCTGCAATCGGTGTTGGTACTGATAATGGACTTGGTGCTCCTAGTATTGCAATCGGCGATGATGACACTGGCCTATCACATGGCGGTGATGGCCGAATCAATATGGTTGCCAATGGTATACATATCGCAAACTGGGGTGCAGGCTATCAATCTCATCCTGGCCTTTGGGATTCAAATGGAGCCTTTTGGACAGAAGCTGGCAGAGCAATTGTTTCTCATGGTCATTTAGTTCAGGCGAATGACAGCTATTCAACGTATGTCCGTGATGTTTATGTCCGCTCTGATATTCGTGTTAAAAAGAACCTCGTTAAATTTGAAAATGCTTCTGAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGTGGAACAGATGAAGAAGGTAATCAGAAATGGGAACCTAACGCTGGTTTGATAGCTCAAGAAGTTCAAGCTATTTTACCAGAATTAGTTGAAGGCGACCTAGATGGTGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCATACTGCAGAAATTGCAGAACTTAAGTCAGAGATTGAAGAGCTTAAAAAATTAGTTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22c4f00146b457edb123e45fd7ea5030db3bb20b89374bac314c82593d01c827
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Novel Phages Infecting Escherichia coli LF82 Steczynska,J.P. and Williams,K.P. 2025-10-09 — GenBank