Protein

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Genbank accession
YP_009804976.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITAGQLTAAVEASAASAAAAKDSENAAKTSEINAKTSETNAKTSETNALTSKNAAAASQTDAATSATNAKTSETNAKTSETSAKASEIAALASKNAAKTSETNAKTSETNAKTSETNALASKNAAAASQTAAKTSETNAEVSETNAKASELAAATSATNAATSETNTLASKNAAATSQIAAKTSETNAKTSETSAKTSETNAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETNTKTSEINSKASEDAAKLAQQGASGSANTATQAMTTTKGYRDEAEGFKNTATTAATTAADKALEAAGSATMAGEKAIAATNAADRAEIAAASAEQVTQASLKKDQNLKDLTDKVAARKELQIQAVVSKDSNNVGDYNSFTSPNVSYELRLANDGGWRVARNSDNATSALPIGAGGTGAENVDQARVNLQVNRVVQTDTFTLLCAPDNTRLVVANNNEVGFQNASGFNIALPISSGGTGATNAAGARANIELGEVNTPSFATVAASLYNGFNSGLFYMRNHDASRNLISYSSIYNELQSSVAKTTLRTTNSTADKTAFYQFDENGQFSAQKIKIGANYSFTMEGGEQNNLQLYAGASVPLDDWANFTRYNWYNDLSLSGAVRSGSDKIKCHRIRVYSPGIDSQDYDFFPQGNLRTRAFNAGTTGGHYGWGIEQQDSGNAIPFNSVSTTNNNASFSPVIAGGTSTPNGYNIRFAIGMLSPGASGWSRTILKLLGDTDKHRGFEFNVDGGLGTWANAPGDMWGVSYDFAKNPTSDRDLKKEIVYTDGKESYDRVMQWLPTMFKYKWGNTQRYGLIAQDLSKIDLQYVKLVSGAPIFEDVIGVDAEGNEYVHHQIETDRADDTLAIDSNVVLADMACAMVYMGNQLEQQRKELDELKKLVSELITPDNS
Physico‐chemical
properties
protein length:976 AA
molecular weight: 102477,72880 Da
isoelectric point:5,12787
aromaticity:0,06352
hydropathy:-0,48678

Domains

Domains [InterPro]
DC_0608
ATT
2–166
DC_0608 DC_1056 DC_1205 DC_0203
PTHR34491
Unmapped
49–432
PTHR34491 IPR030392 Coil
DC_0401
STR
149–217
DC_0401 DC_0415 IPR030392
YP_009804976.1
1 976
Architecture
ATT
STR
ATT
STR
RBD
ATT 2-166 | STR 167-202 | ATT 203-259 | STR 260-709 | RBD 812-975 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009804976.1
1 976
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,8337
Central domain 225 450 227 0,2986
C-terminal 451 976 525 0,7749
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-450
C-terminal
451-976

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S114
[NCBI] 		2231343 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus S114
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009804976.1 [NCBI]
Genbank nucleotide accession
NC_048006.1 [NCBI]
CDS location
range 20919 -> 23849
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTGGTCAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAGAATGCTGCAAAAACATCAGAAATCAATGCAAAAACTTCTGAGACAAACGCTAAGACTTCCGAGACTAATGCATTAACTAGTAAAAATGCGGCTGCAGCCTCTCAAACAGACGCAGCAACTTCTGCTACAAATGCTAAAACTTCAGAAACTAATGCCAAGACTTCTGAAACTAGTGCTAAGGCTTCTGAAATAGCAGCTTTAGCAAGCAAAAACGCAGCAAAAACTTCTGAAACTAACGCAAAAACTTCTGAGACTAATGCCAAGACTTCTGAAACTAATGCATTAGCAAGTAAAAATGCGGCAGCAGCTTCACAAACAGCAGCAAAAACTTCTGAGACTAACGCTGAAGTTTCAGAGACTAACGCTAAAGCTTCCGAATTAGCGGCAGCTACTTCGGCTACGAATGCTGCTACTAGCGAAACTAATACATTAGCAAGCAAAAATGCTGCTGCTACATCACAAATAGCAGCAAAAACTTCTGAAACTAACGCAAAAACTAGTGAGACTAGTGCAAAAACTTCTGAAACTAATGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAACGCAGCAGCATATGCAGCAGCAGCAAAAACTAGTGAGACTAATGCTGCTGATTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATCAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGATACAGAGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACAGCGGCAGATAAGGCCCTGGAGGCCGCTGGTAGTGCTACAATGGCAGGAGAAAAAGCAATTGCAGCTACCAATGCAGCTGACAGAGCGGAAATAGCAGCTGCATCGGCAGAACAGGTTACGCAAGCGTCGTTGAAGAAGGATCAGAACCTTAAAGACCTTACTGATAAAGTTGCTGCAAGGAAGGAACTTCAAATTCAAGCGGTAGTGAGCAAGGACTCTAATAATGTGGGTGATTATAACTCATTCACTAGCCCCAATGTATCATATGAACTTAGACTGGCTAATGATGGCGGTTGGCGTGTTGCAAGAAATAGTGATAATGCTACATCGGCTCTTCCTATTGGTGCTGGTGGCACTGGTGCTGAAAATGTTGATCAAGCTAGAGTTAACCTGCAAGTAAACCGGGTTGTGCAAACTGACACATTCACGCTTCTTTGTGCTCCTGATAATACTAGGTTAGTTGTTGCTAACAATAACGAGGTAGGGTTTCAAAACGCAAGTGGTTTTAACATCGCACTACCAATTTCTAGTGGTGGCACGGGCGCAACGAATGCAGCAGGTGCAAGGGCTAACATAGAATTAGGCGAAGTTAATACACCTAGCTTTGCTACGGTTGCTGCTAGCTTATATAACGGATTCAATTCTGGTCTGTTTTATATGAGGAATCACGATGCTTCTAGAAACTTAATTTCTTATTCCTCTATTTACAACGAACTTCAATCTAGTGTAGCGAAAACAACATTAAGGACTACAAACTCAACCGCCGATAAAACAGCTTTCTACCAATTTGACGAAAATGGTCAATTTAGTGCTCAGAAAATAAAAATTGGTGCTAATTATAGTTTTACAATGGAAGGTGGTGAGCAAAACAATCTCCAACTTTATGCCGGGGCTAGTGTTCCTTTGGATGATTGGGCTAACTTTACTAGGTATAACTGGTATAATGATTTGTCATTATCCGGGGCTGTTAGATCTGGTTCAGACAAGATTAAATGCCATCGCATTCGCGTATACAGTCCTGGTATAGATAGTCAAGATTACGATTTCTTCCCTCAAGGTAATCTTAGAACGCGTGCATTTAATGCTGGTACTACTGGTGGTCACTATGGATGGGGCATTGAGCAGCAAGATAGTGGTAATGCAATTCCATTCAATTCAGTAAGTACAACTAACAATAACGCATCATTCAGTCCGGTAATCGCGGGAGGCACTTCAACTCCAAATGGTTATAACATACGTTTCGCAATTGGGATGTTGTCCCCTGGCGCCTCTGGATGGTCCAGGACAATACTCAAGCTATTAGGCGATACCGATAAACATAGAGGATTTGAGTTTAACGTAGATGGTGGTTTAGGAACATGGGCAAACGCGCCTGGGGATATGTGGGGAGTTAGTTATGATTTTGCAAAAAACCCAACATCTGATCGTGACTTAAAGAAAGAAATTGTTTACACAGATGGAAAGGAAAGTTATGACCGTGTTATGCAGTGGCTGCCTACTATGTTTAAGTATAAGTGGGGTAATACTCAAAGATATGGTTTGATTGCTCAGGACCTTTCTAAGATAGATCTTCAATATGTAAAACTTGTATCAGGGGCTCCTATCTTTGAAGATGTTATTGGCGTTGACGCGGAAGGTAACGAATACGTTCATCACCAAATAGAAACAGACCGGGCAGACGATACACTTGCAATTGACAGTAACGTCGTTCTGGCTGATATGGCCTGTGCTATGGTTTACATGGGTAATCAACTTGAACAACAAAGAAAAGAGCTAGACGAACTGAAAAAACTTGTGAGCGAGCTCATTACGCCAGATAACTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
275421cff16dd2d1e6500d4fde9850fe928ee521eea89af46f6768b218f793d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50