Protein

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Genbank accession
AKJ73458.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MADVSFPTVKVSDLPSAVTVSGGDYVVMDQADTTRKASLDTIMTRMGIMKVVFFSEGGFLESKKDLAFFETNGKYYTWNGTYPKTIPMASSPSTTGGISENAWQEFGASGGGGSTGKVVNLGSVQGTATCDLDRGDSFVANLTGGQCVIIITNPSTAQGVSQSFTLSLTQGTGANLVSWPSNIKWNYGRVPVLSYKTGVRDIFQFVTYDGGNSWFGSLVMAGVE
Physico‐chemical
properties
protein length:224 AA
molecular weight: 23694,32300 Da
isoelectric point:4,97815
aromaticity:0,10714
hydropathy:-0,03125

Domains

Domains [InterPro]
DC_1864
STR
9–224
DC_1864
G3DSA:2.10.10.80
ATT
50–105
G3DSA:2.10.10.80
IPR040775
RBD
54–107
IPR040775
AKJ73458.1
1 224
Architecture
STR
ATT
STR
STR 9-49 | ATT 50-105 | STR 106-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKJ73458.1
1 224
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,6771
Central domain 207 213 8 0,0015
C-terminal 214 224 10 0,9456
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-213
C-terminal
214-224

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 40
[NCBI] 		1654893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ73458.1 [NCBI]
Genbank nucleotide accession
KR296694 [NCBI]
CDS location
range 7343 -> 8017
strand +
CDS
ATGGCAGATGTTTCTTTTCCAACAGTGAAGGTCTCTGACCTTCCTTCCGCCGTCACGGTCTCTGGTGGTGATTATGTGGTCATGGACCAGGCAGACACAACCAGAAAGGCTTCACTTGACACCATTATGACCCGTATGGGTATTATGAAGGTTGTTTTCTTTTCTGAGGGCGGTTTCCTTGAGTCCAAGAAAGACTTGGCATTCTTTGAGACGAATGGTAAATATTACACATGGAACGGAACTTATCCGAAGACAATTCCAATGGCTTCCTCCCCATCAACCACAGGCGGGATCAGTGAGAACGCTTGGCAAGAGTTTGGTGCCAGCGGGGGCGGTGGCTCAACTGGTAAGGTTGTCAATCTCGGGAGTGTCCAAGGGACAGCAACATGTGACCTTGACAGGGGTGATTCTTTTGTTGCCAATTTGACAGGTGGTCAATGTGTTATCATAATTACCAATCCATCGACGGCTCAGGGTGTATCTCAGTCGTTTACCTTATCCTTGACCCAGGGTACAGGGGCGAACCTGGTTTCATGGCCCAGCAACATAAAGTGGAATTATGGGCGTGTTCCAGTTCTTTCTTACAAAACCGGAGTGCGAGACATCTTCCAGTTCGTCACTTATGACGGAGGGAATAGTTGGTTTGGCTCCCTTGTTATGGCAGGAGTTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d21bce2651f53eda15f6143a08923326c6fce5d0c375bcff629d0b3daf2d4b33
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50