Protein

View in Explore
Genbank accession
QBX30470.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MQIWIHDKNMRKVCALNNNVPGMLPYSNSQWHTYLEYSTSTFDFTIPKIVNGKMHEDVKYINDQMYVSFFYDNTYHVFYVSQLVENDTSFQATCNNTNLEFAMESAQSRKSDKPQNIAWYLKELELLGNAGLEIGINEISDKTRTITFESQNGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFIIDIYQQPDENHHGIGKVRGDVILYYQNGLKGVQVASDKTQLFNAGYFVGQEGTNLESVEFEEKNERGQVEFYSKKGSPMVYAPLSMEKYPSTLKDSDTDRWTRKDFETEYKDVNALKGYAISTIKKYAYPLLTYTVDIQSSFIENYKDINLGDTVKIINNNFRGGLTLEARVSEMVISFDMPLNNSVVFTNFRKLDNKPSSDLQQRIDEIAARALPYRVEITTTNGTAFKNGVGRSTVRPVLKQGDKTVNATWRFVIDGVIKYVGMTYDMVASQITQPTALTVSAWVDNKEVASEEVTFLNVSDGRNGTKGDPGPKGDKGEQGPKGDRGNDGLPGKNGIGLKSTTITYGMSDSDTVMPTSWTSNPPVLVKGKYLWTKTQWMYTDLSSETGYQKTYIPQNGSKGDDGLPGKDGVGLVNTTLRYAKSTDGVNKPSGSVIAAISDKYQPSKSTTDNLIATGQRVRLEQGKTYILSAETNGAFTNQHNPNQQSDNATIWLVNPSFSTWAVISDNNTANGTRYTHNRPTGEYNIRVNGYKTDNSTWVKNIVFEDGTWSPDIPTVNPGEYLWTRTTWFYSDGTNEQGFSVAKMGEQGPKGDRGNDGVPGKNGIGIRNTSVLYGLSVSETAPPTAWYENPPALVKGQWFWSKTVWTYTDNTTETGYQKTYVARDGNDGNNGIAGKDGVGIRSTTITYAQGMSGTVAPTTGWTSQVPNVPAGQYLWTKTVWSYTDNTNETGYSVSKIGEQGPQGVKGDTGVKGDRGDRGLQGERGLTGPAGPQGLQGPKGDQGIPGVKGADGKTQYTHIAYADTVSGGGFSQTDTNKPFIGMYQDFNTADSRNPQDYRWSKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGRTGFSLTQDGTKRYLGVCTNFDRENSTNPADYSWNDMTGSVSVGGENLITNSAFPENLDNWGFWQTPQQNPNLSVSQHPYYYNSAKPLFLLKTSSPVPASTPRFSVKRNTDYSFNIQTFATGNIKGVDIYFLGRKSNETSKNYTKAVRFKAHTGSPSVTGLAKWHLTFNSDECDEGYIRIDNTGTTNGSESLLFFTELDCYEGTTDRAWQASPKDLASQLDGKADSALTQSQLNRLNEINSVMKAELEAKVSLDTLNQWVKAYQDFVNANNANRVQAEKNLADASARVAKLENNLNDMSERWNFIDSYMASSNEGLVIGKTDNSSSMLFNPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRFREEQDYINPDRNVIRYVGGK
Physico‐chemical
properties
protein length:1450 AA
molecular weight: 160749,92530 Da
isoelectric point:5,71996
aromaticity:0,10552
hydropathy:-0,66552

Domains

Domains [InterPro]
DC_0002
STR
1–707
DC_0002 DC_1328 DC_1328 Coil
IPR010572
ENZ
141–380
IPR010572 G3DSA:1.20.5.320 DC_1328 IPR008160 DC_0921
PTHR24637
Unmapped
493–1050
PTHR24637
G3DSA:1.20.5.320
STR
947–996
G3DSA:1.20.5.320
QBX30470.1
1 1450
Architecture
STR
STR
STR 1-707 | STR 720-1449 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan536
[NCBI] 		2548249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus salivarius JIM8777
[NCBI] 		347253 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus salivarius

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30470.1 [NCBI]
Genbank nucleotide accession
MK448980.1 [NCBI]
CDS location
range 30922 -> 35274
strand +
CDS
ATGCAAATTTGGATTCATGACAAAAACATGCGTAAGGTTTGTGCCCTAAACAATAACGTTCCGGGCATGTTGCCCTATTCTAACAGTCAGTGGCACACTTATCTTGAATACTCAACCAGTACATTCGATTTCACGATTCCTAAAATCGTTAACGGTAAAATGCACGAGGATGTGAAATACATCAACGATCAAATGTATGTGTCATTTTTCTACGATAATACTTACCACGTTTTCTATGTATCTCAACTTGTCGAGAATGACACGAGCTTTCAAGCGACTTGTAACAACACTAACCTTGAGTTTGCGATGGAATCTGCACAGTCTCGCAAGTCGGATAAACCACAGAATATTGCTTGGTATTTAAAGGAGCTAGAATTATTAGGGAATGCCGGTCTTGAAATTGGTATCAATGAGATTTCTGACAAAACAAGAACTATCACGTTTGAATCTCAAAACGGTACTAAGTTAGAACAACTTCATAGCTTGATGAATCAATTCGACGCTGAATTTGTTTTTCGTACCGACTTAAACCGAGACGGCACTTTGAAAAAGTTTATCATCGACATCTACCAGCAACCAGACGAAAACCACCACGGTATAGGTAAAGTGCGAGGGGATGTCATTCTCTACTACCAAAACGGGCTAAAAGGTGTCCAAGTTGCTAGCGATAAAACCCAACTATTCAATGCTGGGTATTTCGTTGGGCAAGAAGGAACTAATCTTGAGAGCGTTGAGTTTGAAGAAAAAAACGAGCGTGGGCAAGTAGAGTTTTATTCTAAAAAAGGCAGTCCAATGGTCTATGCACCGCTATCTATGGAGAAATACCCGTCAACATTGAAGGATAGTGACACAGATAGATGGACACGCAAGGACTTTGAAACTGAATACAAGGATGTTAATGCATTAAAAGGGTACGCTATTAGCACGATAAAGAAATACGCTTATCCGCTATTGACCTATACCGTCGATATTCAATCTAGTTTTATTGAAAACTACAAGGATATCAATTTAGGGGACACCGTTAAGATTATTAATAATAATTTCAGAGGTGGGTTAACCCTTGAAGCTCGTGTATCTGAAATGGTAATCAGCTTCGACATGCCACTTAATAACTCAGTTGTGTTTACCAATTTCAGAAAGCTGGACAACAAACCATCGTCTGACTTGCAACAGCGTATTGATGAAATCGCAGCAAGAGCCTTGCCGTACCGTGTCGAGATCACAACCACGAACGGAACAGCGTTTAAAAATGGCGTCGGTCGCTCGACTGTTCGACCAGTTTTAAAACAAGGCGATAAAACTGTTAATGCAACGTGGCGTTTCGTAATTGACGGTGTCATTAAATACGTGGGTATGACCTACGACATGGTAGCGTCACAGATTACCCAACCGACAGCGTTGACGGTTTCGGCGTGGGTAGATAATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTTTAAATGTCTCAGACGGTAGAAATGGTACAAAAGGCGACCCCGGACCTAAAGGGGATAAAGGCGAGCAAGGGCCGAAAGGCGATAGAGGTAATGACGGCTTACCCGGTAAAAATGGTATTGGATTAAAATCTACCACTATCACTTATGGCATGAGCGACAGTGACACTGTAATGCCTACAAGCTGGACTTCCAACCCACCCGTTTTAGTTAAAGGTAAATACCTATGGACTAAGACACAGTGGATGTATACGGACTTATCTAGTGAAACTGGATATCAGAAAACATACATTCCACAAAACGGTTCTAAGGGTGATGATGGCCTTCCGGGGAAAGACGGTGTTGGGCTAGTGAATACTACCTTGCGTTATGCGAAATCAACGGACGGTGTAAATAAACCGTCTGGTAGCGTAATCGCAGCAATTAGCGATAAATACCAACCATCTAAATCAACGACTGACAACCTCATCGCGACTGGTCAACGTGTCCGATTAGAACAAGGTAAGACCTACATTTTATCCGCTGAAACTAATGGAGCGTTTACCAATCAGCACAACCCAAACCAACAAAGCGATAATGCTACGATTTGGCTTGTCAATCCAAGTTTCAGTACATGGGCAGTGATTTCCGATAACAACACGGCTAACGGTACGAGATACACCCACAACCGCCCGACTGGTGAATACAATATTCGTGTCAATGGTTATAAAACCGATAATTCGACATGGGTTAAAAACATCGTATTCGAGGACGGCACATGGTCGCCAGATATCCCGACGGTCAACCCCGGTGAATATCTTTGGACTAGAACGACATGGTTTTATTCAGACGGAACGAACGAACAAGGTTTTTCCGTTGCGAAAATGGGCGAACAAGGACCAAAGGGAGACCGTGGGAATGATGGTGTTCCCGGCAAAAATGGTATCGGTATCAGAAATACTAGTGTTCTATACGGTCTATCAGTATCTGAAACCGCGCCACCAACCGCATGGTACGAGAATCCACCAGCATTAGTTAAGGGACAATGGTTTTGGAGCAAGACGGTTTGGACTTACACAGATAACACCACTGAAACGGGATATCAAAAAACCTATGTTGCTAGAGACGGCAACGATGGTAACAACGGTATCGCTGGTAAGGATGGCGTCGGTATTCGTAGCACCACGATTACTTATGCACAAGGAATGTCGGGGACAGTAGCACCAACGACTGGTTGGACTAGTCAAGTACCTAACGTGCCAGCGGGACAATACCTTTGGACTAAAACGGTTTGGAGTTATACGGATAACACTAATGAAACCGGCTATTCAGTTTCTAAAATTGGTGAGCAAGGACCGCAAGGTGTTAAGGGAGACACTGGTGTGAAAGGTGACAGAGGCGATAGAGGTTTACAAGGCGAGCGTGGTTTAACCGGTCCTGCCGGTCCCCAAGGCTTGCAAGGTCCAAAAGGTGACCAAGGTATCCCCGGTGTTAAGGGTGCGGATGGTAAAACACAGTATACCCACATTGCTTATGCTGATACCGTTTCCGGTGGTGGCTTTAGTCAAACAGACACTAACAAACCATTCATCGGAATGTATCAAGATTTCAATACTGCCGATAGCCGTAATCCGCAAGATTACCGCTGGTCTAAGTGGAAAGGTAGCGACGGGCGTGACGGCATTCCGGGTAAAGCTGGAGCAGACGGACGAACACCTTACGTTCACTTCGCCTATGCTGACAGTGCTGATGGCCGCACTGGTTTCAGCCTGACACAGGACGGCACTAAGCGGTATTTGGGCGTATGTACTAACTTCGATAGAGAGAATAGCACTAATCCAGCCGATTACTCATGGAACGATATGACAGGAAGTGTTTCGGTTGGTGGTGAAAACTTAATAACAAACTCAGCATTTCCAGAGAATCTTGATAACTGGGGCTTTTGGCAAACTCCACAACAGAACCCTAATCTGTCTGTTTCACAGCATCCGTATTACTACAATAGCGCTAAACCGCTATTCTTGCTTAAAACATCATCACCAGTACCAGCGTCTACGCCACGTTTTTCAGTCAAACGAAATACTGATTATTCGTTTAATATTCAAACGTTCGCCACTGGGAATATCAAGGGCGTAGACATCTATTTTCTTGGTCGGAAGTCGAACGAAACGAGCAAGAATTACACAAAGGCGGTGCGTTTTAAAGCACACACTGGTTCACCGTCAGTCACCGGACTCGCTAAATGGCACTTAACATTTAATTCTGATGAATGCGACGAAGGCTATATCCGTATTGATAACACTGGCACCACCAACGGCAGTGAGTCGTTGCTATTCTTCACTGAATTAGACTGCTACGAGGGTACGACAGACAGGGCGTGGCAGGCGTCACCGAAAGACCTAGCTAGCCAGTTAGATGGCAAGGCTGACAGTGCTTTGACACAAAGCCAGCTAAACCGATTGAATGAGATTAATTCCGTGATGAAAGCTGAACTCGAAGCTAAAGTGTCCCTTGACACGCTTAATCAGTGGGTGAAGGCTTACCAAGATTTTGTTAATGCAAACAACGCCAACAGGGTACAAGCCGAAAAGAACCTTGCGGACGCCAGTGCCCGTGTTGCAAAACTAGAGAACAATCTGAATGACATGTCAGAGCGTTGGAACTTTATCGACAGTTACATGGCATCGTCTAACGAAGGTCTTGTCATTGGTAAAACAGATAATTCTAGCTCTATGCTATTCAATCCAAATGGTCGCATTTCAATGTTCTCAGCTGGTAACGAGGTCATGTATATCTCGCAAGGTGTCATTCACATTGAAAATGGTATCTTTTCAAAAACCATTCAAATTGGGCGATTTAGGGAAGAACAAGATTACATCAACCCAGACCGTAACGTAATCAGATATGTAGGAGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
813667aaf9e15a6ea30cf5ec9fb0e9282b696a1e4e1d702d44249982849d9235
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7907
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank