Protein

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Genbank accession
GENB_bf2febe2d1f1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYFSVGVDLGGYKVIYDKETQRAYSLPAGIASGTTAVSLNTAAVLVHSAGSVDLGALAVSREEYVTLPGSFDSGSTLNVKNELLTHTDGKYRWDGSLPKTVAVGSTPTTTGGVGVGAWISVGDASLRSYLATNSGSGAVGYSFKGLVNASHRKVNEKLDEYASLWDFHCDSSGNVIQPGLSTDSRQYIQNAVDALSDAGGGTLVIPVGYTWYLNSIGSGAISGHSGIIQLKSNVNIQIEGTIKIGPSLAASAFQVFVGFDNGSPAASGNLNNCHIYTNGNGTIDFGGYDFGSTSQLRNGIAFGKSYNCSVSRIIFQNGDITWAVTTGWNGYGSDCVVRKCRFINLIQSNNNADHSTVYINCPYSGVEGCTFRASSTRAQMIACTVELHQHDTWYRDSFIEGYVRGCYIALHGVEAAGAGTYIYNAVVSGVTGDIAGQAIILAAGSDSVTTTHINGVSVENCRFSAGSQAGMCSFIDFFQDSNSDSSQYLINHVTVKGCSFIVDRNRALSAAITINGSIQGITFQDNFFDVKQAMVSELPSGKTVQLVRFNWDESNIIGDDNTGTRNALNLFETRRVSSMTKCNISLRMRQPSPELFSLMYFRPNETTFSDCTFEVLPYNWSCTSGNPIVFETTDTPPSGMRVRFPKSISFTLPAGSNAQRATGGSGYSWVARADALDTRGISGQFDAPASYSGSSDGKLVGIGWQLDGVQHIYDHNVYLQNFT
Physico‐chemical
properties
protein length:756 AA
molecular weight: 80733,81150 Da
isoelectric point:5,84722
aromaticity:0,10053
hydropathy:-0,11587

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–95
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 G3DSA:6.10.20.90 IPR012334 G3DSA:2.40.30.250
DC_1348
ATT
1–313
DC_1348 IPR041303
IPR040775
RBD
91–156
IPR040775 IPR011050
GENB_bf2febe2d1f1
1 756
Architecture
ATT
STR
RBD
ATT 1-313 | STR 314-669 | RBD 671-755 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_bf2febe2d1f1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,9910
Central domain 211 685 476 0,9872
C-terminal 686 756 70 0,4825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-685
C-terminal
686-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-F
[NCBI] 		2698906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
e83f8491d1067c1ababaa471986fac7007f76aebf0ff03b6c6e717fd015a0cd3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50