Protein

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Genbank accession
AZF87543.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,56
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSVEQYYVVFTGQGVRVFDLNGKEYAVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADTAPLYNLKENGDCLINVRGGQYGRTLAFTINGVRIAYKIHNGVGEGAEQAVQETDAQWLVKKLAGLARAHGSFKDWKFNEGPGFIHVIAPGNSQINSLSTEDGYANQLMNAVMHTSQSFSKLPLEAPNGYTVKIVGDTSKTSDQFYVQYDNVKKVWKEVAGWGVQKGLNGGTMPHALVRQADGSFQMQVLPWSQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEVAQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPKGAYNDDTYTTTVKPVDIYGMKYWTGKFYIVASDGLVSWFDPPRGGWPNGVPVLSMSGNREGETIYVGLAINFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 88192,44140 Da
isoelectric point:7,61616
aromaticity:0,11195
hydropathy:-0,25874

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
AZF87543.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZF87543.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9961
Central domain 142 347 207 0,1042
C-terminal 348 795 447 0,2118
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-347
C-terminal
348-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYPS50
[NCBI] 		2321391 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZF87543.1 [NCBI]
Genbank nucleotide accession
MH809534 [NCBI]
CDS location
range 13796 -> 16183
strand -
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGTTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCCAAACCTCTCGTTCACCTTATCAACCGCGATAGTGTCGAACAGTATTACGTAGTGTTTACCGGACAGGGTGTTCGTGTGTTCGACCTCAATGGTAAAGAGTATGCAGTGAAGGGTGACTTGTCCTACGTTAAGGTAGGGAACCCACGAGATGACTTAAGGATGGTCACTGTGGCTGACTATACGTTTATCGTAAACCGTAACATGGTTGTACGTGCTGACACCGCCCCTTTGTATAACCTTAAGGAGAATGGGGACTGCTTGATTAACGTCCGTGGTGGTCAGTATGGTCGTACATTGGCATTCACTATCAACGGTGTGCGTATTGCCTATAAGATTCACAACGGTGTCGGTGAGGGTGCTGAACAGGCTGTACAGGAGACTGATGCACAGTGGCTCGTTAAGAAACTAGCTGGCCTCGCTCGTGCTCATGGTTCCTTTAAGGACTGGAAGTTCAACGAAGGGCCGGGGTTCATCCATGTGATTGCTCCGGGTAACAGCCAGATTAACTCATTGTCCACTGAAGATGGCTACGCCAACCAGTTGATGAACGCAGTGATGCACACCAGCCAGTCGTTCAGTAAGTTGCCACTTGAGGCTCCTAATGGGTACACGGTGAAGATTGTTGGTGACACCTCTAAGACTTCCGACCAGTTCTACGTTCAGTACGACAACGTGAAGAAGGTGTGGAAAGAGGTTGCTGGATGGGGCGTACAGAAGGGACTCAATGGTGGCACGATGCCTCATGCTCTTGTTCGTCAGGCTGATGGGTCATTCCAGATGCAAGTCCTTCCGTGGTCACAGCGTACCTGTGGTGACATGGATACTAACCCTACTCCGTCGATTGTTGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACATCCAAGTATTTCTCGCTGTTCCCTGCGTCCGTGGCTAACCTGTCCGACGATGACCCGATTGACGTAGCAGTGTCCCACAACCGAATCTCTATCCTGAAGTACGCTGTACCGTTCTCCGAAGAGTTGCTCCTATGGTCAGACCAAGCACAGTTCGTGTTGTCTGCTCAAGGTATCCTCTCACCGAAGTCAGTAGAGTTGAACCTCACGACCGAGTTCGATGTGTCAGACCGAGCGCGACCTTTTGGTGTTGGGCGTGGTGTGTACTTTGCGTCACCTCGTGCTTCCTATACGTCACTTAACCGTTACTATGCGGTACAGGACGTTAGCTCTGTGAAGTCCGCTGAGGATATGAGTGCTCACGTTCCTAGCTACATCCCGAACGGTGTTTTCTCTATTCGTGGCTCCGGTACTGAGAACTTTATCTCCGTGCTGTCTGCGAACGCTCCAAGCAAAATCTTCCTCTACAAGTTCCTCTACTTGAACGAAGAGGTAGCCCAACAGTCGTGGTCACATTGGGAACTTGGAAGCAACGTTACCGTACTGGCCTGTGACTCTATCGGTTCCACCATGTACCTTGTGTTGCGCAACCAGTCCCACACTTGGATGTGCCGTGCTCACTTTACGAAGAACAGCATTGACTTCCCTGATGAACCATACCGTCTGTACATCGACAATAAGGTGAAGTATGTGATTCCTAAAGGTGCATACAATGATGACACTTACACTACCACTGTGAAACCTGTAGACATCTATGGGATGAAATACTGGACTGGTAAGTTCTACATTGTTGCCTCTGATGGTCTGGTCTCTTGGTTCGACCCTCCGCGTGGTGGTTGGCCTAATGGTGTCCCTGTGCTGTCAATGAGTGGGAACCGTGAGGGTGAGACAATCTACGTGGGCTTGGCTATCAACTTCCGCTATGTGTTCTCTAAGTTCCTCATTAAGAAGACAGCCGATGATGGCTCGACAGCTACTGAGGACATTGGGCGCTTGCAGTTACGCCGAGCGTGGGTGAACTATGAGGACTCCGGTGCATTCACTGTAGAAGTGGAGAACACCTCTCGACTGTTCAGCTATGACATGGCAGGTGCTCGCTTGGGTTCCAATGCGTTACGCGCTGGTGGACTTAACGTTGGTACTGGTCAGTTCCGCTTCCCGGTCGCTGGCAACGCACAGTTGAATGAAGTACGTATTATCTCTGACCACACCACGCCACTGAACGTTATTGGCTGTGGCTGGGAGGGTAACTACCTGCGTCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0606fb9d32bad613b420f76847f20ab4e30b91c614e28cdf7a0ff65b046d8fb7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50