Protein

View in Explore
Genbank accession
YP_010682596.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLLTIHDANLQKVGFIDNEKQETLNFYDDTWNRNLETASSTFEFTVSKKELLSDTANKPLYNQLNERSFVSFKYKGKTYLFNIMKTEENERWLRCYCENLNLELINEYTNPYKADRPLSFAEYLDVFEIPQFAMVTLGINEISDQKRTLEWEGQETKLARLLSLANKFDAEVEFVTRLNDDSSINQLILNVYHKADDSHTGVGRIRGDIRLTFEKNIKSMTRKVDKTEIYTLVVPYGKSKETHEGEQEVRVYIDSLPPWEEKNDEGIVIFKQEGVNLYAPHAADLYPSTFGVSTQSNKWIRKDLEVDSDNPNVIRAAGIANLRKHAYPAITYEVDGFVDVEIGDTITIHDKGFTPALDIRARAVEQKISFSNPTNNKTTFGNFKELENRTSGDLRSVFEQMVENIRPYNILVSTDNGVLFKNNTGQSTLRPTLKRGNQVVNATYRFVIDGSIVSSGLTYTVKASDITKPTVITISAWVDNKEVASEEVTFVNVSDGKQGPKGADGKTPYVHFAYADSADGQKGFSLTQTGTKRYLGVYTDFNQADSTNPADYTWSDTAGSVSVGGDNLIVNSAFPKDLDGWGYWETGLPNENLHIATHEFYFNGARNLFRLDDNGKVGVPAASRRFSVKRNTDYSFNIQTFATGNIKGLTIYFLGRRANETDKTFTKVVNLKTHTGSPSVTQSVKWHLTFNSADCDEGFIRIDNSGTTDGKTSMLFFAELDCYEGTTDRAWQASPEDLKDEIDTKADDALTQAQLNKLSEINSVMKAELEAKASLATVNQWIKAYQDFVNANSADRAQAQKALADASARVVKLENNLNDMSERWNFIDNYMAASNDGLVIGKKDNSSSIMFNPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRFREEQDFINPDRNVIRYAGGI
Physico‐chemical
properties
protein length:910 AA
molecular weight: 102366,84780 Da
isoelectric point:5,21403
aromaticity:0,10220
hydropathy:-0,51099

Domains

Domains [InterPro]
DC_0002
STR
1–910
DC_0002
IPR007119
Unmapped
57–381
IPR007119 Coil
IPR010572
ENZ
145–385
IPR010572
YP_010682596.1
1 910
Architecture
STR
STR 1-910
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010682596.1
1 910
Domain Start End Length (AA) Confidence
N-terminal 1 625 625 0,8769
Central domain 626 869 245 0,1003
C-terminal 870 910 40 0,9410
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-625
Central
626-869
C-terminal
870-910

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC1247
[NCBI] 		2365033 Uroviricota > Caudoviricetes > Aliceevansviridae > Brussowvirus CHPC1247 >
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010682596.1 [NCBI]
Genbank nucleotide accession
NC_071066.1 [NCBI]
CDS location
range 15776 -> 18508
strand +
CDS
ATGTTGCTAACAATTCACGACGCTAATTTACAAAAAGTTGGCTTCATCGATAACGAAAAGCAAGAAACACTAAATTTCTACGATGACACTTGGAACCGAAACCTTGAGACTGCTTCAAGTACATTCGAGTTTACTGTTTCAAAAAAAGAGCTGCTGAGCGATACAGCAAATAAGCCGCTTTATAACCAACTAAACGAGCGCTCTTTTGTCTCCTTCAAATATAAAGGCAAGACATACCTTTTCAACATCATGAAAACGGAAGAGAATGAGCGATGGTTACGATGCTATTGTGAAAACTTAAATCTCGAGCTGATAAATGAGTACACGAACCCTTACAAAGCTGATAGACCTTTGTCATTTGCGGAGTATCTTGATGTTTTTGAAATTCCTCAGTTTGCAATGGTAACGTTGGGCATTAATGAGATCTCAGATCAAAAAAGAACGCTCGAATGGGAGGGGCAAGAGACAAAATTAGCAAGGCTCTTGAGTTTGGCCAATAAATTCGATGCTGAGGTTGAATTTGTAACAAGGCTAAATGACGACAGCTCTATCAACCAGCTCATTTTGAACGTTTACCATAAAGCGGACGACTCGCACACTGGTGTGGGGCGGATTCGGGGCGACATTCGTCTGACATTTGAAAAAAATATCAAGTCAATGACGAGGAAAGTCGACAAGACTGAGATCTATACGCTGGTAGTGCCTTATGGCAAATCGAAAGAGACCCATGAAGGCGAGCAAGAAGTACGTGTCTACATTGACAGCCTTCCGCCTTGGGAGGAAAAGAATGACGAAGGTATTGTTATCTTCAAACAAGAAGGTGTCAACCTCTATGCACCTCATGCAGCCGACTTATACCCGTCTACTTTTGGCGTATCAACTCAATCTAATAAATGGATTCGGAAAGATCTTGAGGTCGATAGTGACAATCCGAACGTTATCCGTGCCGCAGGAATTGCAAATTTGCGTAAACACGCATATCCAGCTATCACTTACGAGGTTGACGGTTTTGTAGATGTAGAAATCGGGGATACCATAACAATCCACGACAAAGGATTCACACCAGCGCTTGACATAAGAGCGCGTGCCGTTGAGCAAAAAATCAGCTTCAGCAACCCCACCAACAATAAGACCACTTTCGGAAACTTCAAAGAGCTTGAAAATAGGACATCTGGAGACCTTAGAAGTGTCTTTGAGCAAATGGTTGAGAACATTCGACCATACAATATCCTAGTCTCAACTGATAACGGTGTCTTGTTTAAAAACAATACAGGGCAGTCAACACTACGCCCAACATTAAAAAGGGGTAATCAGGTTGTTAATGCAACCTATCGATTTGTGATCGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTAATTACAATTTCAGCGTGGGTAGATAATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTGTAAATGTATCAGATGGTAAACAAGGACCTAAAGGTGCTGACGGGAAAACACCTTATGTTCACTTTGCTTATGCCGATAGTGCCGATGGTCAAAAGGGTTTCAGTTTAACCCAGACTGGTACCAAGAGGTATTTAGGTGTGTACACAGATTTCAATCAAGCGGACAGCACTAACCCAGCTGATTATACTTGGAGTGACACGGCTGGCAGCGTTTCGGTTGGTGGTGATAATTTAATCGTTAACTCAGCTTTTCCAAAAGACCTTGACGGATGGGGTTATTGGGAAACAGGATTGCCTAATGAAAATCTTCATATAGCAACACATGAATTTTATTTCAATGGTGCAAGAAATCTTTTTAGACTAGATGATAACGGCAAGGTGGGAGTTCCTGCTGCATCAAGACGTTTCTCAGTAAAACGAAATACAGATTATTCGTTTAATATTCAGACTTTCGCTACTGGTAATATCAAGGGCTTAACTATCTATTTTCTTGGTCGCAGAGCTAATGAAACCGACAAGACATTTACTAAAGTGGTCAATTTAAAAACACATACAGGTTCACCATCGGTCACACAATCTGTTAAATGGCACTTAACGTTTAACTCTGCTGATTGCGATGAAGGATTCATTCGTATCGATAACAGTGGAACGACTGACGGTAAAACTTCTATGCTATTTTTTGCAGAACTAGACTGCTATGAGGGAACCACTGACCGAGCTTGGCAAGCGTCACCGGAAGACTTAAAGGACGAGATAGACACTAAAGCCGATGATGCATTAACGCAGGCTCAGCTTAATAAATTAAGTGAAATTAATTCGGTGATGAAAGCAGAGCTCGAAGCAAAAGCATCCCTTGCCACTGTTAATCAATGGATTAAGGCTTATCAAGATTTTGTTAATGCAAACAGCGCAGATCGTGCGCAGGCTCAAAAGGCTTTGGCAGATGCCAGTGCACGAGTAGTGAAACTAGAAAATAACTTAAACGATATGTCAGAGCGTTGGAATTTTATCGATAACTACATGGCAGCATCAAATGATGGTTTGGTTATCGGGAAGAAAGATAACTCCAGCTCTATTATGTTCAATCCAAATGGGCGTATATCAATGTTTTCAGCTGGTAATGAGGTAATGTATATCTCTCAGGGTGTGATTCACATTGAGAACGGTATTTTTTCTAAGACTATTCAAATTGGACGATTCCGAGAAGAACAAGATTTTATTAATCCGGATCGCAACGTCATCCGCTATGCAGGAGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef0bf983588f7c07456520b62b91fa30750d65d98825acdf973383061ae1da74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7639
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank