Protein

View in Explore
Genbank accession
YP_009030455.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MWYQWTGSYPHNFAASPTTPQQSYQGWICRGTLNQFPVNDPRNFGAHSNIEFGYQDFDSTDAIQLMIDSARFLQDNAGDNWNLQFARRGYFNFGGFCYNVSRPILVQDDHVTGLRASGMRIENGGLRALPGFTPAVQKKNAAGDTRSISAFFILGAKDYGFQSGQYVSYIKIQDMSFEGNNFACDAVVWADVVAHCFMNNIEATEVKYGVTGNVVSFSQFTNWRLVDVNSAVTINNTSVEDGYNSGIGIEGGGNHFIGFTIIGDGFNDQGLNRFHFIYNGEFNISNVISYNGLGDFLVVSSLAGGDTGTQSKWSRLLNCEVGDLGGRIMKADYVSNLQVEINAIKCGRLLGGAAPLVQITNCDAIDIHPNFDQFYDMPSVWREVIEVVDSSRVNIHQGTIVSIPAANNLFSMIAFKGNSQRCNVAPLSSNIAGHAKMYIFPVSSEATCSAISVIGGSFVEGAFISGTPDLKGVGDSYTAVNIGASNVSDSPRASLSLSNTNTPVVTFKEQHILKENVSASGAPLLSIDFLDAGKTHCADIEVSIAASTVTGIGSYFGKFKIRFIRSIDGSGRANISPDIDAYSDGSVSTISISVTETHTQYGIVLGVLPTFGGTSAESLCNISANVKANSMYRINMHQ
Physico‐chemical
properties
protein length:638 AA
molecular weight: 68845,12420 Da
isoelectric point:5,23251
aromaticity:0,10658
hydropathy:-0,04687

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009030455.1
1 638
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,9729
Central domain 60 484 426 0,9734
C-terminal 485 638 153 0,9749
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-484
C-terminal
485-638

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB-SalM-SJ3
[NCBI] 		1446492 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009030455.1 [NCBI]
Genbank nucleotide accession
NC_024122 [NCBI]
CDS location
range 99227 -> 101143
strand +
CDS
ATGTGGTATCAGTGGACTGGTTCATATCCGCATAATTTTGCTGCATCACCTACCACGCCACAGCAGTCGTATCAGGGATGGATTTGTCGTGGAACATTGAATCAATTCCCAGTAAATGACCCGAGAAACTTTGGTGCTCACTCAAACATTGAATTTGGATATCAGGATTTTGATTCGACCGATGCTATTCAGTTGATGATTGATAGTGCACGTTTCCTTCAGGATAATGCTGGCGATAACTGGAACCTCCAATTTGCACGCCGTGGATATTTCAATTTTGGTGGATTCTGCTATAACGTTTCCAGACCTATTCTGGTGCAAGATGACCACGTAACTGGTTTGCGCGCGTCGGGTATGCGAATTGAAAATGGGGGACTGCGTGCGCTGCCGGGGTTTACTCCTGCTGTTCAGAAAAAGAACGCTGCTGGCGATACTCGCAGCATCAGCGCATTCTTTATCCTCGGCGCTAAAGATTACGGCTTCCAGAGTGGTCAGTACGTCTCTTACATCAAAATTCAGGATATGTCTTTTGAGGGGAACAACTTCGCTTGTGATGCTGTTGTGTGGGCCGACGTGGTTGCACATTGCTTCATGAATAATATTGAAGCGACTGAAGTAAAATACGGTGTAACGGGTAACGTAGTTAGCTTTTCTCAGTTTACTAACTGGAGACTCGTTGACGTCAATTCAGCGGTAACTATTAACAATACCAGTGTTGAGGACGGATATAACTCGGGCATTGGTATTGAGGGTGGCGGAAACCACTTCATCGGTTTCACTATTATCGGTGATGGTTTCAATGACCAGGGATTAAACCGGTTCCACTTCATCTATAATGGCGAGTTCAACATCTCAAACGTTATCAGTTATAACGGTCTTGGTGATTTCCTGGTTGTAAGCTCGCTGGCGGGTGGCGATACCGGAACTCAATCTAAATGGTCGCGACTGCTGAACTGTGAAGTAGGAGACCTTGGTGGCAGAATCATGAAGGCCGATTATGTAAGTAACTTGCAGGTCGAGATTAATGCCATCAAGTGCGGAAGGTTGCTGGGTGGTGCAGCTCCATTGGTGCAGATAACAAACTGTGATGCTATCGATATCCACCCTAATTTTGACCAGTTCTATGATATGCCCTCTGTATGGCGTGAAGTCATTGAGGTTGTTGATAGCTCACGTGTAAATATCCACCAGGGAACAATCGTCTCTATCCCGGCGGCGAACAACCTCTTTAGCATGATCGCGTTTAAGGGTAACAGCCAGCGATGCAACGTCGCACCGCTATCCTCTAATATCGCTGGTCACGCCAAGATGTATATCTTCCCTGTGTCATCTGAGGCCACCTGCTCAGCGATTTCGGTAATCGGCGGCTCTTTTGTGGAAGGTGCTTTCATTTCAGGAACCCCAGACCTTAAGGGGGTGGGGGATTCTTACACTGCCGTTAATATTGGGGCAAGTAATGTTAGTGATTCTCCAAGAGCATCATTAAGCCTTTCAAATACAAATACCCCAGTTGTAACTTTTAAAGAACAGCATATTTTAAAAGAAAACGTGTCGGCTTCTGGTGCTCCTCTATTATCAATTGATTTTTTGGACGCTGGAAAAACTCATTGCGCGGATATTGAGGTTAGTATTGCAGCATCAACGGTAACAGGTATTGGTTCTTACTTTGGTAAATTTAAGATAAGATTTATCCGCAGCATTGATGGTAGCGGTAGGGCTAACATTTCTCCAGATATTGATGCATACTCTGATGGGTCAGTTTCTACTATTAGTATATCTGTTACCGAGACACATACTCAGTATGGTATTGTGCTAGGTGTTTTACCTACATTTGGTGGGACGTCAGCGGAATCTCTCTGCAATATCTCTGCAAATGTAAAAGCAAATAGCATGTACCGTATAAATATGCACCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ce1886733ea697f064184877459735d3c133265b360b06e54c16e0c5061a557
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50