Protein

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Genbank accession
YP_010684979.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTNKPIPSEDPRDLKFNAGKIDEEVNGSADYYTDRFGAQRLTNTGRNNQFQTAQDEREAEFVASQENKELRFQQFLLNSGYQFLGDYENGPYTIDAINQVIRYQGEFWRLNASTTPPYTTTGVNSSSWAVDVTHLVSVGDAVLRQELSKVITWLDLNSFDDLDKTGATSVTSQLSTIFANAYAQGIRKVVDTTPGNPVYRIGGSEDFVIPGLTFEMENSEFIYDVNWTGQLVITDPSTPVTVYDSSTTEGAALLSKINGSSSQSKLAQSMQIDGLVDDTTLNNNVCVFDSGIGAYYSRGNIRTWKHIALISTRGLMSDALYYSLTGTVSSVTAWQVKPNTTIIKLPKFNFEEKPHAVNVLLKGLSRYEIWGPNVSKRPLIDDGSEYVISMVNCFDCEVRWGYDIHPNVALNGSGQLAYSSYTLNYNFCLDCRFINQYSMGFGWGSTAGEVCSNTTFINCKLNRFDFHEPMQGRTSLIDCTAGDKGISMCGMGRLDVIRCDLKPETLNAPYPPTETTMIKTRDDIGGWFDGDIYIENSIVSGGFTYNDNNAIPSYFIGGMINMSSTNPAGDILPPGSPVVPRLFRDVTIKGFKHLRRYTGERYSRFIYSNLPQYLKHPESITLDDFDYFCDQPLVFGFGNWLDTYYTDDTTSPPMAIDTTCHVTINRGAFAGLTFAGTGNKQNISVKINQVRDLRYGKKGVAIVASTRGVYDISDSDITSLSAVFGSSQPTVPNVIKVTGGTFKVFNSAIMPMTANDTVYHDVSAANVAFLGDFSASTITATNLNLAKWFKLSGCQFFTTTGAKVPYMKLFSGSIGTTPVSVSVPIRNGNDIVTQSVYNSLTTNDTFKISSLSGNLGRKLYNGADGGYFLNISITGNRALINSATASAAAMLREIYLAA
Physico‐chemical
properties
protein length:902 AA
molecular weight: 99090,94550 Da
isoelectric point:5,20005
aromaticity:0,10976
hydropathy:-0,21330

Domains

Domains [InterPro]
DC_1559
ATT
1–185
DC_1559 DC_1183
YP_010684979.1
1 902
Architecture
ATT
RBD
ATT 1-185 | RBD 598-900 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010684979.1
1 902
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9928
Central domain 174 817 645 0,9891
C-terminal 818 902 84 0,9382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-817
C-terminal
818-902

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiS13d
[NCBI] 		2874888 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010684979.1 [NCBI]
Genbank nucleotide accession
NC_071142.1 [NCBI]
CDS location
range 29391 -> 32099
strand +
CDS
ATGGCTACTACCCCAACTAACAAGCCAATTCCTTCTGAAGACCCGCGCGACCTGAAGTTTAACGCCGGTAAGATTGATGAAGAAGTCAATGGCAGTGCTGATTACTACACCGACCGATTTGGCGCGCAGAGGCTGACGAATACCGGCAGGAATAACCAGTTTCAGACAGCACAAGATGAGCGTGAGGCAGAATTTGTTGCGTCACAGGAAAATAAAGAATTGCGCTTTCAGCAGTTCCTCTTAAATTCAGGCTATCAATTTTTAGGTGATTATGAAAACGGCCCGTATACAATTGATGCCATTAACCAGGTGATTCGCTATCAAGGTGAATTCTGGCGCTTAAACGCATCAACAACGCCACCATATACAACCACGGGGGTTAACAGCTCCTCTTGGGCAGTAGATGTGACTCATCTTGTAAGTGTCGGTGATGCTGTATTACGCCAGGAGTTATCGAAAGTAATAACATGGTTAGACCTTAACTCTTTTGATGATTTGGATAAGACAGGGGCAACGTCTGTTACCTCGCAATTAAGCACCATTTTTGCAAATGCGTATGCTCAAGGGATAAGAAAGGTAGTTGATACTACACCAGGAAATCCTGTTTACAGGATTGGTGGCAGTGAGGATTTTGTGATCCCCGGATTAACCTTTGAAATGGAAAATTCAGAATTCATCTATGATGTTAACTGGACAGGACAGCTAGTTATAACCGATCCATCCACCCCGGTTACGGTGTATGACTCCAGCACTACTGAAGGCGCAGCGCTATTATCTAAGATAAACGGGTCTAGTTCACAAAGTAAACTCGCGCAATCAATGCAGATTGACGGCCTGGTAGATGACACCACGCTAAACAATAATGTGTGCGTGTTTGATTCCGGCATCGGCGCGTATTACTCCAGAGGTAACATCCGCACATGGAAACACATTGCGTTAATCTCAACTCGCGGGTTAATGTCAGATGCATTGTATTACAGTTTAACAGGGACCGTATCATCTGTAACTGCGTGGCAGGTTAAGCCAAACACCACCATAATTAAGCTGCCAAAGTTCAATTTCGAAGAAAAACCGCACGCCGTTAACGTACTGCTTAAAGGATTAAGCCGCTACGAAATATGGGGGCCTAATGTAAGCAAGCGCCCACTTATTGATGATGGTTCGGAATACGTTATTAGCATGGTTAACTGCTTCGATTGCGAGGTCAGATGGGGGTATGATATCCATCCTAACGTGGCCCTGAACGGCAGCGGACAATTGGCGTATTCTTCATACACTCTGAACTATAATTTCTGCCTAGATTGCCGGTTTATCAATCAGTATTCAATGGGTTTTGGCTGGGGCTCTACCGCTGGGGAAGTATGCTCTAATACCACTTTTATTAATTGTAAACTAAACCGTTTCGATTTCCACGAACCCATGCAAGGTCGCACATCACTTATTGATTGCACTGCCGGTGACAAGGGAATTAGTATGTGCGGCATGGGGCGGCTAGACGTTATCCGATGTGATCTCAAACCTGAAACATTAAATGCCCCGTACCCACCTACAGAAACTACGATGATCAAAACCCGTGATGATATAGGTGGTTGGTTCGATGGCGATATTTATATTGAAAATAGTATTGTGTCAGGCGGGTTTACTTATAACGACAACAACGCGATACCAAGTTATTTCATTGGTGGGATGATCAATATGTCGTCTACCAATCCGGCCGGCGATATCCTGCCCCCGGGATCACCCGTTGTACCCCGACTATTCAGGGACGTCACAATAAAAGGGTTTAAACACCTTCGCCGCTATACCGGTGAACGCTATAGCCGTTTCATTTACTCTAACTTGCCTCAATACTTAAAACATCCGGAGTCTATAACCCTGGATGACTTCGATTACTTCTGTGATCAGCCTCTGGTATTTGGTTTTGGTAACTGGCTTGATACGTATTACACAGATGATACGACTTCGCCGCCAATGGCTATTGATACAACATGTCATGTAACTATTAATCGCGGGGCCTTCGCCGGATTAACCTTCGCCGGAACCGGTAATAAACAAAACATCAGCGTTAAAATTAATCAGGTTAGGGATTTGCGCTACGGCAAAAAAGGCGTGGCTATTGTCGCAAGCACACGCGGGGTTTACGATATTAGTGATTCTGATATTACAAGTCTTAGCGCGGTGTTTGGTTCATCTCAGCCAACGGTGCCAAATGTCATTAAAGTTACTGGCGGTACATTCAAGGTGTTTAATAGCGCCATAATGCCTATGACCGCCAATGACACTGTATATCATGACGTCTCTGCCGCAAACGTCGCATTTTTGGGGGATTTCTCAGCGTCGACGATCACGGCAACAAACCTCAATCTCGCCAAATGGTTCAAATTGTCTGGATGTCAATTCTTCACCACTACTGGCGCTAAAGTGCCGTATATGAAGTTATTCTCTGGATCTATCGGCACTACGCCGGTTTCTGTGTCGGTGCCGATTCGTAATGGTAACGACATAGTGACTCAAAGTGTATATAACTCTCTGACGACTAATGACACCTTTAAGATTAGTAGTCTTTCTGGCAACTTAGGACGTAAGTTATATAACGGGGCCGATGGTGGATACTTCCTTAACATAAGTATCACGGGGAACCGTGCTTTAATAAACTCAGCAACTGCATCGGCGGCTGCTATGTTACGTGAAATATACCTGGCAGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a85ab2afa490ef4c304a1ee76746dcb5506c30ddcd4a77135bf37a6e219b00b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7052
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank