Protein

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Genbank accession
ATE85783.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAYTEIAMAVGNSPEILARNVKMMISSGFQPYGDVQMLSGTLFGMKMAKGTANNVEDFMVTSDTTIQGLVNRVNRYLAQGWRRFGNAHFEDGAYLSALAKGDFVSDEEGGSGEAGPQGPVGPQGPAGPAGAIGPQGPQGPTGATGPAGAAGAKGETGPAGPVGPQGPQGETGEAGPQGPIGATGAAGPAGPKGDKGDAGPVGPAGLTFRGMYDAATAYVKDDVVTFNNSSWFATAAVTGENPDVSDSWELLAAQGAPGPQGSAGPAGPTGPTGPAGIQGPQGERGLQGEQGPAGPQGLQGVAGAVGPQGPAGPQGERGLQGPTGPQGLQGVAGPASYNVASGVRSGLINQTDTDFIDIPGETTIRFALTGEKNATVAAKGLWVGVSNTGTSNIASIRHTAYQIDSLTTVAADKLKNYTAIVTSMPPGTALWNSVFKPGVFGVTSEHYVTTSPGATADSKCFKLTIVGIRNSSDALAGVYAYKVENLSEPLA
Physico‐chemical
properties
protein length:491 AA
molecular weight: 48910,64060 Da
isoelectric point:4,80343
aromaticity:0,06314
hydropathy:-0,23585

Domains

Domains [InterPro]
DC_1122
ATT
3–106
DC_1122 IPR050149
IPR008160
STR
148–205
IPR008160 IPR036573 IPR008160
DC_0876
STR
150–285
DC_0876 DC_1687
G3DSA:1.20.5.320
STR
181–228
G3DSA:1.20.5.320 G3DSA:1.20.5.320
IPR003610
CBM
212–251
IPR003610
ATE85783.1
1 491
Architecture
ATT
STR
ATT 3-106 | STR 148-437 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sf12
[NCBI] 		2024315 Uroviricota > Caudoviricetes > Drexlerviridae > Eastlansingvirus > Eastlansingvirus Sf12
Host Escherichia coli B
[NCBI] 		37762 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATE85783.1 [NCBI]
Genbank nucleotide accession
MF158039.1 [NCBI]
CDS location
range 34681 -> 36156
strand -
CDS
ATGGCTTACACAGAAATTGCTATGGCAGTAGGGAATTCACCTGAAATCTTAGCCAGAAACGTAAAAATGATGATTTCATCAGGATTCCAGCCATATGGCGACGTGCAGATGCTGAGCGGCACCCTCTTTGGCATGAAGATGGCGAAGGGAACAGCAAACAACGTTGAAGACTTCATGGTGACATCCGATACCACAATTCAGGGATTAGTTAACAGGGTTAACAGATATCTAGCCCAGGGCTGGCGCAGGTTTGGCAATGCCCACTTCGAAGATGGTGCTTATCTTTCAGCGCTGGCGAAAGGTGATTTTGTAAGTGATGAAGAAGGAGGCTCAGGTGAAGCAGGCCCACAAGGTCCGGTTGGTCCACAGGGTCCAGCGGGCCCGGCAGGAGCTATTGGTCCACAGGGTCCTCAAGGCCCAACAGGTGCTACCGGCCCGGCAGGCGCGGCAGGTGCTAAAGGCGAAACTGGTCCAGCTGGCCCCGTAGGCCCGCAAGGTCCTCAAGGTGAAACTGGCGAGGCTGGTCCGCAAGGCCCTATCGGTGCAACTGGCGCAGCAGGTCCTGCTGGCCCTAAAGGTGATAAAGGTGATGCGGGCCCAGTTGGTCCGGCAGGCTTAACATTCCGCGGGATGTACGACGCAGCGACAGCTTACGTTAAAGATGACGTTGTTACATTCAATAACTCAAGCTGGTTTGCTACCGCCGCCGTGACCGGAGAAAATCCAGATGTTAGCGATTCCTGGGAGTTACTGGCCGCACAGGGTGCTCCAGGCCCACAGGGTTCCGCTGGTCCAGCAGGCCCAACTGGCCCGACAGGTCCGGCAGGTATTCAAGGCCCACAAGGCGAGAGGGGCCTGCAAGGTGAGCAAGGCCCAGCTGGCCCGCAAGGCTTACAAGGTGTAGCTGGTGCAGTTGGACCACAAGGCCCGGCAGGCCCGCAGGGTGAGCGTGGATTGCAGGGCCCTACGGGACCTCAGGGCTTACAGGGGGTGGCTGGTCCAGCCTCTTATAACGTAGCTTCAGGCGTAAGGTCAGGGTTGATCAATCAGACGGATACTGACTTTATAGATATACCTGGAGAGACAACAATAAGGTTCGCTCTTACCGGAGAGAAGAATGCGACAGTTGCCGCTAAGGGGCTGTGGGTTGGTGTTAGTAATACCGGTACATCAAACATCGCTTCAATAAGGCACACTGCATACCAGATTGACTCACTCACTACAGTTGCAGCTGATAAGTTGAAAAACTACACAGCGATAGTAACAAGCATGCCTCCTGGGACTGCTCTTTGGAATAGCGTGTTCAAGCCAGGAGTTTTTGGAGTCACATCTGAGCACTACGTAACCACATCACCAGGAGCTACAGCTGACTCTAAATGCTTCAAGCTTACAATAGTTGGCATAAGGAACTCATCCGATGCCTTGGCTGGCGTTTACGCTTATAAGGTGGAAAACTTAAGCGAACCTCTCGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4036b8da086d3ae50ab612f736788841edcbdafbd31983ce72cfcc8960c8ab8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6390
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank