Protein

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Genbank accession
YP_010300211.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MATESIYVDALRLTPQGEQAVANANSGGLAVQPVSFKAGDFVGSNPSVVPEQLLGNELASGALSYVQVLTENSARFVFDIKINYVAGEQMKRVGELLIMLSDNRPFGHVVLEEPIIAVPNSISRVSLLVHIQQDIQKILAVKMADYTSIPSVATLQNLPSLKDNVFNAVSVLDLHVNSDGSKSPGVAYRYGAGSYYWGFSEHDRLFSGQITTAGFINANTFKIASLAATLKANEVVIIQTIAGTGAGACRHFKYVGGQLVNQDDPIPFISAQTTIAVWRRITNPTTPSAGLPWPDNNDVPDTWALMRGKDNKPYWAPVGGSTRQTTATLFVPPGKMLFSSVVTTATPDKMRYTLTENLDSSTDLFVGTSGILQPRTAYSVVDDQLLLSSFPEQRMSLDLRQFRIEPSQGHVVLFETYEGTGDGQTTTFSLGSKPIDSVDMIFCVVGSTWQPTTVYKLNAGNKVTLTEAIPSGQRYSFYVARYEERANWSTRIRIGQYRFPYDSDTFTLPTTPLNKAHCVMAMGGLTVHPMDFTVAGNVIKTTSPIPADTLVEITIFENVMAVGSKDSSVDGVIIDAIPTPTGYMFKRQGLPPIDVPIAAPAIIQGEGILIKGTWPEITISNTQALAEEADPKNMFNIHQTVEDSEELTITQRIDFSKGVMLTCIADFQCQLGPGFAATSGKEHIEYVLSFKIPGTAEAEYGRGLKGTGSAGFNVVTSDANLTEVIAYANVSLTQMFTVLIENQPQGFIDIVAKVRITDSQITSYGSKLTGNLCIKVEPK
Physico‐chemical
properties
protein length:779 AA
molecular weight: 84406,94890 Da
isoelectric point:5,17447
aromaticity:0,08472
hydropathy:-0,01977

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010300211.1
1 779
Domain Start End Length (AA) Confidence
N-terminal 1 624 624 0,9991
Central domain 625 768 145 0,0018
C-terminal 769 779 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-624
Central
625-768
C-terminal
769-779

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_35
[NCBI] 		2869557 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010300211.1 [NCBI]
Genbank nucleotide accession
NC_061442.1 [NCBI]
CDS location
range 71727 -> 74066
strand -
CDS
ATGGCCACTGAATCTATCTACGTTGACGCTCTGCGTCTAACGCCTCAGGGAGAACAGGCCGTTGCGAACGCTAACTCTGGTGGACTAGCAGTTCAGCCAGTGTCGTTTAAAGCAGGTGACTTTGTAGGCTCAAACCCGTCAGTGGTTCCAGAGCAGTTACTTGGCAACGAGCTTGCGTCGGGCGCCCTGTCATATGTTCAGGTACTTACCGAGAACAGTGCCCGATTTGTCTTCGATATTAAAATCAACTACGTTGCTGGCGAGCAGATGAAGCGTGTAGGTGAGCTGTTGATCATGCTCTCGGACAACCGCCCATTCGGGCACGTTGTTCTGGAAGAGCCTATCATCGCTGTACCGAACTCTATCAGCCGTGTGAGCTTGCTCGTACATATCCAGCAGGACATTCAAAAGATTCTTGCTGTTAAAATGGCGGACTACACTTCTATTCCTAGTGTGGCTACGCTGCAAAATCTGCCAAGCTTAAAAGATAACGTGTTCAATGCCGTATCGGTACTTGACTTACATGTTAACTCTGACGGCTCTAAGTCTCCCGGTGTTGCCTATCGCTACGGCGCAGGCTCCTACTACTGGGGATTCAGCGAGCATGATCGTTTATTCAGCGGCCAGATAACGACTGCTGGGTTCATCAATGCCAACACGTTTAAGATTGCAAGCCTTGCTGCAACTCTGAAAGCGAATGAAGTTGTGATCATTCAGACAATCGCAGGCACTGGTGCTGGTGCGTGTCGTCACTTCAAGTACGTTGGTGGGCAGCTCGTTAACCAAGACGACCCTATTCCGTTTATCAGTGCTCAGACTACTATCGCAGTATGGCGTCGAATCACTAACCCGACAACACCATCCGCAGGTCTGCCTTGGCCTGACAATAACGATGTGCCTGACACATGGGCGTTAATGCGCGGTAAAGACAACAAGCCTTATTGGGCACCTGTTGGTGGCTCTACGCGTCAGACCACAGCAACATTGTTTGTGCCTCCAGGTAAGATGTTGTTCAGTTCTGTGGTGACTACTGCTACGCCTGATAAGATGCGATACACGCTGACCGAGAACCTCGATAGCTCGACTGATTTGTTTGTCGGAACATCAGGTATCCTGCAACCGCGTACCGCGTATAGCGTTGTGGATGACCAGCTTCTGCTTTCATCTTTCCCTGAGCAGCGCATGTCTCTTGACTTGAGACAGTTCCGCATCGAACCTTCTCAAGGTCACGTTGTTCTGTTTGAAACGTATGAAGGTACTGGTGACGGTCAAACCACTACGTTCTCTTTGGGCAGCAAGCCGATTGATAGCGTGGACATGATCTTCTGCGTCGTTGGTAGTACGTGGCAGCCTACAACTGTCTACAAGCTCAACGCAGGTAACAAGGTAACGCTGACAGAAGCAATCCCGTCAGGACAACGCTACTCATTCTATGTGGCTCGCTATGAAGAACGCGCCAACTGGTCTACTCGCATTCGTATTGGTCAGTATCGCTTCCCTTATGATTCTGATACATTTACTCTGCCGACTACACCACTGAACAAAGCGCACTGCGTTATGGCCATGGGTGGTCTGACAGTACACCCTATGGACTTCACCGTCGCGGGTAACGTGATTAAAACAACGTCACCTATTCCTGCTGACACACTCGTTGAGATCACTATCTTCGAGAACGTCATGGCGGTAGGCTCAAAAGATAGTTCTGTTGATGGTGTTATCATTGACGCTATCCCTACGCCAACAGGTTACATGTTCAAGCGTCAGGGTCTGCCTCCGATTGATGTGCCTATCGCTGCCCCGGCCATCATTCAGGGTGAAGGTATACTGATTAAGGGTACGTGGCCCGAGATTACTATCAGCAATACTCAGGCACTAGCCGAAGAAGCTGATCCGAAGAACATGTTCAACATCCACCAGACAGTAGAGGACTCAGAGGAGCTGACTATCACTCAGCGCATCGACTTCTCGAAAGGTGTGATGCTTACCTGTATCGCTGACTTCCAGTGTCAACTGGGCCCAGGCTTTGCGGCCACTAGCGGTAAAGAGCACATTGAATATGTTCTGTCGTTCAAAATCCCAGGCACAGCAGAAGCTGAATACGGTCGCGGTTTAAAGGGCACAGGCAGCGCTGGATTCAACGTTGTCACGTCTGACGCCAATCTTACGGAAGTGATTGCGTATGCTAACGTTAGCCTGACGCAGATGTTCACCGTGCTTATTGAGAACCAACCTCAGGGCTTCATTGATATCGTGGCTAAGGTGCGTATCACCGATTCGCAGATCACTAGCTACGGTTCGAAGCTGACTGGTAACTTGTGCATTAAGGTTGAACCGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
89aaa7efe03af6138f8b4064aa8741095ccc24bda8a339f5c66f5f1c66ec8c05
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_35 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank