Protein

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Genbank accession
YP_009097866.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVAKSFRATSGIDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTVQQYDPARGYSAFMAIIYARRIWYARADIASPAGAFDETKWISTRNDPKWVYNNVTSVDGLPVESGTYLMADGRFSELTYILPDAPVEGDIITIKDGGGMVGINSMLVRSNTRQIRLRDVQSSSYRLTHPYMTVAFIFNGNLWRVAEMLDNRDSQFVNATGAGSFQMQSGMTTFRNSGTGKITLQLPKYANDGDSITTYDLDKLSSVNVATLQVYPGSGHTITYDSINGVTSVASQRSGYGVFIFDQTNNRWVVYDGDNRVRLRRISDDLNMLPNDYVFVTPIAGNPPTIRNVTLTLPQDVAEGDRVYISMYMMGKTQNCTIKVKDGSGETIRTNKNMMQFPQRKDYPPDDWFSVTTLSFNADTDYLPYMELSYLKATKEWVVAQYRPLVERVDPTNRSRLGVIALATQAEVNKNLEDLPSDELAVTPRTLANKTATETRRGIARLATTAEVNQNTTATFLDDIIVTPKKLNERTATEDRRGILEIATQAETNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLITPKSLNEKTATEKSKGLVVLATENEVITGAAAGSASMPIVVTPEMLHRKTSTEARIGLIEIATQTETNTGTDDTRAVTPKKLNDRKATETLDGIIALATTAEVAAGTVTNKAVVPVKLKEFFDVAGHIAVATADGLTQSGTIWTTVNLGIAAATETQRGTLRVATQAETNAGTLDTVIITAKKLQAKKATDTAEGIIRCATNSEAAAGTSTNLAITPATMQYLNGNDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQPVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNTYNGTSTFVGDVVTNGTLTANAAVTVNATVTTNNNINQSAKANTVYANTVLGTAAAGTKNLLRTFRGGTTDTTWHETVQGSVYRMATGATDLVDVLTVGDVGNGVLAYYGNTLRLNSKTLANINANGDVTIASDASPTVQLRTAATNGWNGVTISNDNGTTTATVINTRNFTQHLDSTYVNVTGDTMTGALSVNVSGTGGRFTSVSGTAHIQAGDFSGPIQKMRLTGINDQVLTEFNINITDYTKAMINGNLIYHAGRKPTPAEIGAVAVAGSTVDTLVVRNYIKIGNVKIYANPVTKTCEFEWEE
Physico‐chemical
properties
protein length:1219 AA
molecular weight: 130921,10450 Da
isoelectric point:5,80630
aromaticity:0,06891
hydropathy:-0,23142

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009097866.1
1 1219
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,7456
Central domain 292 707 417 0,1176
C-terminal 708 1219 511 0,6149
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-707
C-terminal
708-1219

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Miller
[NCBI] 		1527524 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus miller
Host Citrobacter
[NCBI] 		544 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae >
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009097866.1 [NCBI]
Genbank nucleotide accession
NC_025414 [NCBI]
CDS location
range 163822 -> 167481
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCCACAAGTGGCATTGATGCTGCTGGCGAAAAGGTTATCAACGTTGGTAAAGCATCCCGCTCTGTGTTGAGCGACGGCGTGAACGTTGACTTTTTTAACGAATTTAACACCGTACAACAGTACGATCCTGCTCGCGGTTATTCTGCGTTTATGGCTATCATATATGCGCGTCGTATTTGGTATGCTCGTGCGGATATTGCATCACCAGCAGGGGCTTTTGATGAAACAAAATGGATTTCAACCCGTAACGATCCGAAATGGGTTTATAACAACGTAACAAGTGTTGATGGTCTTCCCGTTGAATCCGGTACATACTTAATGGCTGATGGTCGTTTCTCTGAACTGACTTATATTCTGCCAGATGCACCAGTAGAAGGGGATATTATCACGATTAAAGATGGTGGCGGGATGGTTGGTATCAACAGTATGTTGGTACGTTCTAACACTCGTCAGATCCGTCTGCGTGATGTTCAATCCAGTTCTTACCGACTGACTCACCCATATATGACCGTTGCGTTTATTTTTAACGGTAACTTATGGCGCGTTGCTGAAATGCTAGACAATCGGGATTCACAGTTTGTGAACGCAACTGGTGCTGGATCTTTCCAGATGCAATCCGGTATGACTACATTCCGTAATAGCGGTACTGGTAAAATCACTCTTCAATTGCCGAAGTATGCAAACGATGGTGACTCCATCACAACTTACGACCTTGATAAACTGAGTTCGGTAAACGTTGCAACATTACAGGTATATCCTGGTAGCGGTCATACGATCACTTATGATAGCATTAACGGCGTAACCTCTGTTGCTTCACAGCGTTCCGGTTATGGTGTATTCATCTTTGACCAGACTAACAACCGCTGGGTTGTTTATGATGGTGATAACCGCGTTCGTCTGCGTCGTATCAGTGATGACCTGAACATGCTCCCGAACGATTATGTTTTCGTTACTCCGATTGCTGGGAACCCTCCAACTATCCGTAACGTAACATTAACCCTCCCGCAAGATGTTGCAGAAGGGGATCGCGTGTACATCAGTATGTACATGATGGGTAAAACACAGAACTGTACGATCAAAGTTAAAGATGGTTCCGGTGAAACAATCCGCACCAACAAAAACATGATGCAGTTCCCACAGCGTAAAGACTATCCACCTGATGATTGGTTTAGCGTGACTACGCTTTCGTTTAACGCAGATACTGACTATCTTCCATATATGGAGTTGTCTTACCTGAAAGCAACGAAAGAATGGGTTGTTGCACAGTATCGACCACTGGTTGAACGTGTTGATCCAACTAACCGTTCTCGTTTGGGTGTTATTGCGCTTGCTACTCAGGCAGAAGTAAACAAAAACCTGGAAGATTTGCCGTCTGATGAACTGGCAGTAACCCCGCGTACACTGGCGAATAAAACCGCTACTGAAACGCGCCGTGGTATCGCTCGCCTGGCGACGACAGCAGAAGTAAACCAGAACACTACGGCTACTTTTTTGGATGATATAATCGTAACGCCTAAAAAGCTGAACGAACGTACAGCAACAGAAGATCGTCGCGGTATACTGGAAATTGCTACTCAGGCAGAAACTAACGCTGGCACGGATGACACTACCGCAATCACGCCTAAAAAGCTCGATACGCGTCGTGCAACCGAAACCCTAGCAGGTATCGGAAAACTCGTCACCACGGGTGCTACGACTGCTGAGGGGGCTTTACGTGGGGATGCTGGTACTAACGTCTACAACTTCAATAACGGTGTTGATCTGATCACTCCGAAATCGTTGAACGAGAAGACAGCAACCGAGAAATCGAAAGGTTTGGTTGTGCTGGCGACGGAAAACGAAGTTATTACGGGCGCTGCTGCTGGATCTGCTTCAATGCCGATCGTAGTTACTCCTGAAATGTTACATCGTAAAACGTCTACTGAGGCGCGGATCGGTTTGATTGAGATCGCAACTCAGACAGAAACCAACACAGGAACCGATGATACTCGTGCGGTAACGCCTAAAAAGCTGAATGATCGTAAAGCGACAGAAACGCTTGATGGTATTATTGCACTGGCAACCACTGCGGAAGTTGCAGCGGGTACAGTAACGAATAAAGCGGTTGTTCCGGTTAAGTTGAAAGAGTTTTTCGACGTTGCTGGTCATATTGCTGTTGCAACTGCTGATGGTTTGACTCAATCCGGTACTATCTGGACTACGGTTAACCTGGGGATCGCGGCTGCTACTGAAACTCAACGTGGTACTTTGCGCGTTGCTACTCAGGCAGAAACAAACGCGGGTACTCTTGATACTGTTATCATCACTGCGAAGAAATTGCAAGCTAAAAAAGCTACCGACACAGCAGAAGGTATTATTCGCTGTGCAACGAATAGCGAAGCGGCTGCGGGTACTTCTACAAACCTGGCAATTACTCCGGCAACAATGCAGTATCTGAACGGTAACGATCCGGCGTGGGGTGCAACAACTACTCGTCGCGGTGCTGTATTCATTACCACTAAATCGAATACGTTCATTGGTGATAATCTGGTTGGTTCTACTCAACCTGTAGACAGTTACCTTGAAGATTTCTATGCTGTATCGCCTCGCGGTCTTAACTTTGCCCTGCAAAACTTCTTACCGAAAATGGCAACAGCACAGAATAGCTTGAGTCTGGGTGGTGTGGTTGCTGCAAGTTGGATGCGTCGTGATGCTGATCAAACCGTAACGGGGAACAACACGTATAACGGCACAAGCACTTTCGTGGGTGACGTAGTTACTAACGGGACGCTGACGGCAAATGCTGCTGTAACCGTTAACGCAACAGTGACAACGAACAACAACATTAACCAATCTGCGAAAGCAAATACGGTTTATGCGAATACTGTTCTGGGTACTGCTGCTGCTGGAACCAAAAACCTGCTTCGTACTTTCCGTGGTGGTACAACGGATACTACATGGCATGAAACGGTTCAGGGTTCAGTGTATCGCATGGCAACGGGTGCAACTGATTTGGTTGATGTTCTGACGGTTGGTGATGTTGGTAATGGTGTGCTGGCTTACTACGGTAATACATTGCGACTGAACAGCAAAACCCTGGCAAACATTAACGCAAACGGTGATGTTACTATTGCGAGTGATGCAAGCCCTACGGTACAATTACGGACTGCTGCAACTAATGGCTGGAACGGTGTTACCATCAGTAACGACAACGGGACAACCACAGCAACGGTGATCAACACCAGAAACTTTACCCAGCACCTTGACAGTACGTATGTCAACGTAACGGGTGATACCATGACGGGTGCGCTGTCTGTCAACGTTAGTGGTACTGGTGGACGCTTTACCAGTGTAAGCGGTACAGCACATATTCAGGCGGGTGATTTCTCTGGCCCGATCCAGAAAATGCGCTTAACGGGTATTAACGATCAGGTATTGACTGAGTTTAACATCAATATCACCGATTACACCAAAGCGATGATCAACGGGAACCTGATTTATCATGCAGGTCGCAAACCTACTCCGGCAGAAATCGGGGCTGTTGCGGTTGCTGGTTCGACAGTAGACACGCTGGTAGTTCGCAACTACATCAAGATCGGAAACGTAAAAATCTACGCAAACCCAGTCACTAAGACTTGTGAGTTTGAGTGGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c9020c5c8e3c983d7e9d5ca50097b3de3c3498eac670baa7ca599f81bf8a1af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50