Protein

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Genbank accession
AXN58441.1 [GenBank]
Protein name
putative tail fiber-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDINNELNEFFSYIKQAKQQKKEEIEAQEKEYRDLVGDLSLESVLADYSAHLRGEDPPKRKAKEVQEDKREKQIQEIDSWLTPQVESNDVKDIVNSIISSNKEPVVTEDKTNDDVIDHALRILEKVTTKEEVQTNTTSPEISKIRRELENLKNIVAAQGGGGEVNLKYLDDVSITSVANHDVLVYNNSTEKWENEVGVQRLILDARNNTGSTLAAGTPVYQTGYNSGQDRITIAAADANVSSTMPAKGVVCDPIANNTNGFIVVYGEQEGVDTSAFNVADELYVAPGAGLTNVRPTGSGELVQKIAVVLKKSAGNGAILVYGAGRTNDVPNEISISGIITAAALSVSGNISCAGTITYNDVTNVDSLGIGTFRSGVVVNTGTATTALVVNGDARITGILTIGTSSLTLNGTDNFIQVGTGLTIRDTGDAVYSGVITATTFNSGAITITGQTETDTLNVSGVSTFNANVSIASSVLLGDNNKVMFGDDDDLQIYHTGGTESVIKENGDGPLKILTNRLDIKNSGDANTMASFKSGTNGVDLYYDNSKKFETTSTGIDVTGHTETDTLNVSGLSTFGGRLLIGTTASTTFSNNIQPLQQIRGTGSAGIGIVRDQDNGNPATLFLTKTRGDDTTIVQSGDSLGEIRFCGSDGVDVRSTAARIYAEVNDTPGSNSMPGKLVFGVSGTGDIAAPDRMVIDGLGDVGIGTDNPRNSAKLDVHNSTSNGVYINYDGTSNTDFGLRIESNAAGGNFESDFVNGTAALLDLYANSSTVTGGDLLVARTQSSTPVLLVRGNGNIGIGTNNPLGKVHVESAATTAGWQIRTDSAGLNNESGFYRDANDHYELVLRNGSGGLSYLKNDGGASTANLLFTVQGSERMRITSDGLVGIGTDAPGKKLHVVSSESTSANFESTGSNSSIRFINSTATNVYIGNKDTNNFHISTGGSERVRITSSGVVGIGTDNPSSTSQLHIYDGSAGCDLTITSGNTNAVDINLGDIDDYDVGRIRYNNQNDSMSFRTNGSDNRLRIDSSGDVGIATDSPDRRLHVRGSQNNICRIESSNNNSRIEFKDSGTDSNATVSIGSSGNAFQINTNTSGTGTRRVTVQGDGEILFGTQTRTADSSSGITFVPSTNGRVLLDCGTTNTATAQLQRFFNGNGQVGNIATNGSATAYNTSSDYRLKENITPMVGAADRVKSLKPCRFNFIADDSKTVDGFLAHEVQEVVPESVTGTKDETEEIGTLTEWDGTILETNTPEPDSLIWDETITDEDDNETVETRTRTWVKTGDRPVMQGIDQAKLVPLLTAALQEAIAKIETLEQRLTDAGL
Physico‐chemical
properties
protein length:1319 AA
molecular weight: 139656,42410 Da
isoelectric point:4,58437
aromaticity:0,05155
hydropathy:-0,36884

Domains

Domains [InterPro]
Coil
Unmapped
15–38
Coil DC_0132 DC_0955 DC_1386 DC_1367
DC_1367
RBD
976–1072
DC_1367 IPR030392
IPR030392
CHP
1170–1222
IPR030392 Coil
AXN58441.1
1 1319
Architecture
STR
STR
STR
RBD
STR 131-199 | STR 361-693 | STR 842-988 | RBD 989-1319
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXN58441.1
1 1319
Domain Start End Length (AA) Confidence
N-terminal 1 333 333 0,6724
Central domain 334 532 200 0,3071
C-terminal 533 1319 786 0,8622
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-333
Central
334-532
C-terminal
533-1319

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus virus S-PRM1
[NCBI] 		2100130 Uroviricota > Caudoviricetes > Pantevenvirales > Makelovirus > Makelovirus prm1
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
d35d3b3a1c7c4ea0cbc6b278f993892bbff81218d4139d7a0734dabf2c8c52c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5559
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50