Protein

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Genbank accession
YP_008125578.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MSEINVNTVTTTTANVSGDASVTGTLSAGGLKHASANTSALTPNADGSVSVAGNVTTTGVVQGNTIKTGALQDLNGDPLSTGQVLQVVQRVSNSYGEFGNSAYGNNLSNLTAIGDWWIDITSTVANSKFLIQWKTKMYGPNTQHQYVDLRRRVGGSGSFTSLIETNRTNSTIDTFAGIHWQSGNGAFEGDYFSTFIDSPNQPVNTVIRYQQYLGGWAGGTIDFGGWDAANNQNARGMIVMIAWELAP
Physico‐chemical
properties
protein length:247 AA
molecular weight: 26142,40870 Da
isoelectric point:5,00970
aromaticity:0,08907
hydropathy:-0,23603

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008125578.1 [NCBI]
Genbank nucleotide accession
NC_021530.1 [NCBI]
CDS location
range 37235 -> 37978
strand +
CDS
ATGTCTGAAATTAATGTAAATACAGTCACTACAACGACTGCTAACGTGTCTGGTGATGCAAGTGTTACAGGCACGCTAAGTGCAGGTGGTCTAAAACATGCTTCTGCAAATACATCAGCTCTTACACCAAACGCTGATGGTAGTGTTAGTGTTGCAGGTAATGTTACCACTACAGGTGTTGTTCAGGGCAACACTATTAAAACTGGTGCTCTTCAAGATTTGAATGGTGATCCTCTGTCAACGGGACAAGTTTTGCAAGTTGTGCAGAGAGTTAGCAACTCTTATGGTGAGTTTGGCAACTCTGCATATGGTAATAATCTAAGTAACTTAACTGCAATTGGAGATTGGTGGATTGATATTACATCAACAGTAGCAAACTCCAAATTTCTAATACAGTGGAAGACTAAAATGTATGGTCCTAACACTCAGCACCAATATGTTGACTTGAGAAGAAGAGTTGGTGGAAGTGGTAGTTTTACCTCACTGATTGAAACGAATCGTACAAATAGCACTATTGATACTTTTGCAGGAATTCATTGGCAAAGTGGTAACGGTGCTTTTGAAGGAGACTACTTCTCAACCTTCATAGATTCACCAAATCAACCAGTAAATACCGTCATCCGTTATCAACAATATCTTGGTGGTTGGGCAGGCGGCACAATTGATTTTGGCGGTTGGGATGCTGCTAATAACCAAAATGCTCGTGGCATGATTGTCATGATTGCATGGGAACTTGCACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b671a6c736640c19ca2f65d6a85a02cd6c3034665818c420c00632bceb9de0b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6926
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608BI06 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank