Protein

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Genbank accession
YP_002128472.1 [GenBank]
Protein name
gp38 putative tail-fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MILPAECSATQARRLMYEPNLTLSDHEGRSAERASEIKGAIKEVGHAVEKLNIFKSKDGGSMDAIIPALLAGGNQGGVGTGLGAGVLGGVLGGALLGGNGLVNRNNGLVNEGFVTPAQLTAALAGVTDTLQSTTILQTLGDIKAAVPLAEGQVQLALAGAQADINGNINSSLQIAVQGQANINKNISESIATALAGQSAIKESIAAYGVANLTATKDAQYALSVAITNDGEKTRALIASNEMANLQRMLTVSESRALEDRLTARTREVEVNVTNTNTNTATAIQAQNQAQAQSQAIIQLAAELRNLSGDIQAVRQSQVTFNSGTMTGSGTQSAANTKVG
Physico‐chemical
properties
protein length:339 AA
molecular weight: 34686,52410 Da
isoelectric point:5,36756
aromaticity:0,01770
hydropathy:-0,04808

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Iodobacter phage PhiPLPE
[NCBI] 		551895 Uroviricota > Caudoviricetes > Iodovirus >
Host Iodobacter sp. CdM7
[NCBI] 		641420 Bacteria > Proteobacteria > Betaproteobacteria > Neisseriales > Chromobacteriaceae > Iodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002128472.1 [NCBI]
Genbank nucleotide accession
NC_011142 [NCBI]
CDS location
range 22588 -> 23607
strand +
CDS
ATGATTCTACCTGCTGAATGTTCAGCAACTCAAGCGAGGCGTTTGATGTACGAACCAAATTTAACGCTATCTGATCACGAAGGCCGTTCTGCTGAGCGGGCCAGCGAGATCAAGGGCGCAATCAAAGAAGTCGGCCATGCGGTCGAAAAACTGAATATTTTCAAATCAAAGGATGGTGGTTCTATGGATGCAATTATTCCGGCGTTGTTGGCTGGCGGGAATCAGGGTGGTGTTGGCACTGGTTTAGGTGCTGGCGTATTGGGTGGAGTGCTGGGTGGCGCTTTGCTGGGCGGGAACGGCCTTGTCAATCGCAACAACGGCTTAGTGAATGAAGGGTTTGTAACGCCTGCACAGCTTACTGCCGCGCTTGCTGGCGTGACTGATACACTACAAAGCACAACCATCCTGCAAACTCTTGGTGACATCAAAGCAGCCGTTCCACTGGCAGAGGGCCAGGTGCAGCTTGCTCTTGCTGGCGCTCAGGCAGATATCAACGGCAACATTAATTCAAGCCTGCAAATTGCCGTGCAAGGTCAGGCTAACATTAACAAAAATATTTCCGAGTCAATCGCCACCGCGCTGGCCGGGCAATCGGCTATCAAGGAAAGCATCGCCGCGTATGGCGTTGCTAATTTGACGGCGACTAAAGATGCTCAGTACGCGCTGTCTGTTGCGATCACAAACGATGGCGAAAAAACACGCGCCCTGATCGCCTCCAACGAAATGGCAAACCTGCAGCGCATGTTGACCGTTAGCGAATCCCGCGCACTGGAAGACCGATTGACCGCACGAACTCGTGAAGTTGAGGTGAATGTTACCAACACCAACACAAACACCGCAACGGCCATTCAAGCGCAGAATCAAGCTCAGGCACAAAGCCAGGCCATCATCCAGCTGGCTGCTGAACTGCGTAATTTGTCCGGTGATATCCAGGCGGTTAGACAGTCACAAGTCACGTTTAACAGTGGCACAATGACTGGATCAGGCACTCAGTCTGCGGCAAATACCAAGGTGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
876195eda4e60520228bf8c7ceb519d40c21d3a2a228e3389fcc5b99516469bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4520
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50