Protein

View in Explore
Genbank accession
XNO96129.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,97
Protein sequence
MADYGILLTNDRGNVWVSPQSIPLALLSKQGITLRGGTHSDEVRSVTYDTNHPCVPFVVFHGSSPNGAFTKIRYSGNTCSVVFSFGKQNVYAEVYFFSVFPQPNPGYGLAIWDENGTLILTNETRTLSDVQTYGTGFNLNVTNGGKWAVSPVQLGAIVGVIRDPYPRPFQGDYGAAAFFNGSSTQLTAYLTQAPGGAASDLTYVDMKNTCIAIDCARYD
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23664,20540 Da
isoelectric point:5,51920
aromaticity:0,12329
hydropathy:-0,08219

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNO96129.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 104 104 0,2126
Central domain 105 208 105 0,0009
C-terminal 209 219 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-104
Central
105-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth42
[NCBI] 		3384126 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNO96129.1 [NCBI]
Genbank nucleotide accession
PQ657806 [NCBI]
CDS location
range 28012 -> 28671
strand +
CDS
ATGGCAGATTACGGAATTTTACTTACCAATGATAGAGGCAATGTTTGGGTTTCGCCTCAAAGCATCCCGCTGGCACTGCTATCAAAGCAAGGCATAACTCTTAGAGGGGGGACTCACTCCGATGAGGTGAGATCGGTAACTTACGACACGAATCACCCATGCGTTCCGTTCGTGGTCTTTCATGGCTCATCACCAAACGGCGCTTTCACAAAAATTAGGTACAGCGGAAACACTTGCAGCGTTGTTTTTTCTTTTGGTAAGCAAAACGTATATGCGGAGGTTTATTTTTTCTCCGTGTTCCCACAGCCAAATCCTGGTTATGGGCTTGCAATTTGGGATGAAAACGGCACGCTGATTTTGACCAATGAAACCAGAACACTTTCAGACGTACAGACCTACGGCACTGGTTTTAATCTAAACGTCACTAACGGCGGAAAGTGGGCGGTTAGTCCTGTTCAGTTGGGGGCGATCGTTGGTGTCATTCGTGATCCATACCCAAGACCATTTCAGGGCGACTATGGCGCAGCGGCATTCTTTAACGGCTCAAGCACGCAACTTACCGCATATCTAACGCAGGCACCAGGAGGGGCCGCCAGCGATCTAACCTACGTCGATATGAAAAATACCTGCATCGCTATTGATTGCGCAAGGTATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7367cae63cbbfe9f4ba73f5be8ab9d32538c7ffd49943359c9780f0a3d71f368
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8333
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank