Protein

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Genbank accession
YP_009147636.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MATETSGKYYFKGNFWAGGVIVDEYSVLQDENGDWWKYTGYRRTKPFNVMAGERPDSSSWSNVGTLMASGITDQDVTFDKGGKIENKNQFVLDEVSGMWYYWNGPLPKQVPPHSSVDLTGGVSSETWMPIEGLISQNLTNIRALQQLVSNQSETIILLNDMQVKQAGTIDQLQADQDTQGQHNGSQGQQLTAVQQRLSTLEKDSQDGSTAMDAVQEGMGVVSAQTDKNTTSIKGIQDGMGQLADSVNQMGQAVTTQNEVIANQTTAINGVKESTRQQTEVLSKQQESVSRIQNSQSSLAARIDSNDLRDDTQDGRLDAQDTAITNLQNRVKATEQTDATQSQAMGELDRRIGSQESKANDQGVTIKALGESVTAVQHRLDQAGTDNETRQAVIDGLKKTSDDQATTLVNQGKAVQTNTDDIAALKKHDTDQDIVVTAHGKSIENIQSTVNTNGTDISGLKDLTQRHTQTLSEHTTSLKTLGDSVQAAAQTGSTNSQAIQAQAQKVDSQGQAISTLNLSVKSVTDAVSTLQNNVGGWQTQVNALTQALENKFAKPTGAVGQYIRGDGSLATFPTINPGTVTSIQAGTGLEGGTITGSGTIGMPNVGTAKNNMVSVNTDAQGRVTGGRQRVFNYPTRALNTAFQVSATQDANVNYTVDVSATSLLLGGTTGRVILEYADNAAMTTNLVTVNEAVNGTSGVLNVVNIGSGNVNGWIPAGKYVRIRTANTSGTAVFTFVRAEEVLQ
Physico‐chemical
properties
protein length:742 AA
molecular weight: 79119,04130 Da
isoelectric point:4,85851
aromaticity:0,04313
hydropathy:-0,49838

Domains

Domains [InterPro]
DC_0682
STR
2–70
DC_0682 IPR040775 DC_1303
DC_0018
ATT
64–250
DC_0018 Coil
G3DSA:2.10.10.80
ATT
71–140
G3DSA:2.10.10.80
YP_009147636.1
1 742
Architecture
STR
ATT
STR
STR 2-63 | ATT 64-250 | STR 264-356 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009147636.1
1 742
Domain Start End Length (AA) Confidence
N-terminal 1 622 622 0,9928
Central domain 623 731 110 0,0089
C-terminal 732 742 10 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-622
Central
623-731
C-terminal
732-742

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phiEa2809
[NCBI] 		1564096 Uroviricota > Caudoviricetes > Pantevenvirales > Nezavisimistyvirus > Nezavisimistyvirus Ea2809
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009147636.1 [NCBI]
Genbank nucleotide accession
NC_027340 [NCBI]
CDS location
range 135303 -> 137531
strand -
CDS
ATGGCAACCGAGACTTCCGGAAAGTATTATTTTAAGGGTAACTTCTGGGCCGGTGGCGTCATAGTTGATGAGTACAGTGTTCTACAGGATGAAAATGGCGACTGGTGGAAGTACACAGGATATAGAAGAACCAAACCTTTTAACGTAATGGCAGGGGAACGGCCCGACTCCAGCAGCTGGTCAAACGTCGGAACCCTCATGGCTTCTGGTATTACAGACCAGGATGTCACCTTTGACAAGGGCGGTAAAATCGAAAACAAGAACCAGTTCGTTCTTGATGAAGTATCAGGGATGTGGTATTACTGGAACGGCCCACTACCAAAGCAAGTACCGCCGCACTCTTCTGTTGATCTCACTGGTGGTGTCAGTTCAGAAACATGGATGCCTATCGAAGGTCTCATCTCTCAGAATCTCACCAATATCCGTGCGCTACAGCAACTGGTGTCCAACCAGTCTGAAACTATCATTCTGCTTAATGATATGCAGGTCAAACAGGCTGGGACGATTGACCAGCTCCAGGCCGATCAGGACACCCAGGGTCAACATAATGGGAGTCAGGGCCAGCAACTCACTGCTGTACAACAACGGCTAAGCACCCTTGAGAAGGATTCTCAGGACGGCTCCACTGCTATGGATGCAGTCCAAGAGGGTATGGGTGTAGTAAGTGCTCAGACGGACAAGAACACCACTTCCATAAAGGGTATCCAGGACGGTATGGGACAGCTGGCTGATTCTGTTAACCAGATGGGCCAGGCCGTCACAACCCAGAATGAGGTTATCGCTAATCAGACGACTGCCATCAACGGGGTTAAGGAATCCACTCGTCAACAGACCGAAGTGTTGTCCAAGCAGCAGGAGTCAGTCTCTCGCATCCAGAACTCACAGTCCAGTCTGGCGGCCCGTATTGACTCCAACGATCTGCGTGATGACACCCAGGACGGGCGGCTTGATGCTCAGGATACTGCGATCACCAATTTACAGAACCGGGTGAAGGCAACAGAGCAGACAGACGCAACTCAATCTCAGGCGATGGGTGAACTGGACCGTAGAATTGGCTCTCAGGAGTCCAAGGCTAATGACCAGGGCGTTACCATCAAGGCGCTGGGTGAGTCTGTGACAGCCGTTCAGCATCGCTTAGATCAGGCTGGGACCGATAATGAAACTCGACAGGCTGTGATCGATGGTTTGAAGAAGACCTCAGACGATCAGGCAACAACACTGGTCAATCAGGGTAAGGCTGTTCAGACCAACACTGATGATATCGCAGCGCTGAAGAAGCATGACACCGATCAGGATATTGTGGTCACTGCTCATGGTAAGAGTATTGAGAACATCCAGAGCACTGTGAACACAAATGGGACTGATATCAGTGGCCTCAAAGATCTCACTCAGCGACATACCCAGACGTTGTCAGAGCACACAACTTCTCTGAAGACTCTCGGTGACTCTGTTCAGGCGGCGGCCCAAACGGGTTCCACCAACTCTCAGGCTATCCAGGCTCAGGCCCAGAAGGTTGATTCACAAGGACAGGCAATCAGCACCCTGAACCTGTCGGTCAAGAGTGTAACCGATGCTGTCAGCACCTTACAGAACAATGTGGGTGGATGGCAGACTCAGGTCAATGCTCTGACTCAGGCTCTGGAAAATAAGTTCGCCAAGCCAACAGGGGCCGTCGGTCAGTACATTCGCGGTGATGGAAGCCTGGCAACCTTCCCTACCATCAACCCAGGTACAGTTACGAGTATCCAGGCAGGTACGGGCTTAGAAGGCGGTACGATCACAGGCTCTGGTACAATCGGTATGCCCAACGTCGGTACAGCCAAGAACAACATGGTCTCAGTGAACACGGATGCTCAGGGTCGGGTAACAGGCGGGCGTCAGCGCGTATTCAATTATCCAACTCGTGCTCTGAACACTGCCTTTCAGGTAAGTGCAACTCAGGACGCCAATGTCAACTATACGGTAGATGTGTCGGCGACTTCCCTCTTGCTCGGAGGTACGACAGGTCGAGTGATATTGGAGTATGCTGACAACGCAGCCATGACAACAAACCTGGTAACAGTGAATGAGGCCGTGAACGGAACCAGCGGCGTTCTCAACGTGGTGAACATCGGTTCTGGTAATGTCAACGGCTGGATTCCTGCAGGCAAGTATGTGAGGATCCGGACAGCGAACACCAGTGGCACAGCTGTCTTCACCTTTGTCCGTGCTGAAGAGGTGTTGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c207607e008d9cc6f4231c8625226fed8c08b9605e3f1a479c4b052ab6d08a4e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new ViI-like Erwinia amylovora bacteriophage Lagonenko,A.L. and Valentovich,L.N. — — GenBank