Protein

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Genbank accession
QVJ12639.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLGIFTSLLSSRSFSIVDQNTNQLVAADLRISRVNTRFSSVGQRHMLEDGTTKMDSRTIHPMEIIVEVFCPSIDVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPEMISATPARLTFSQVLVQNPKPIMFRNAGDSSIIDRGLALAEDVVDSASDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19908,56480 Da
isoelectric point:4,72459
aromaticity:0,06145
hydropathy:0,05642

Domains

Domains [InterPro]
DC_0601
STR
1–178
DC_0601
IPR054442
ATT
4–166
IPR054442
QVJ12639.1
1 179
Architecture
ATT
STR
ATT 1-166 | STR 167-178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA09
[NCBI] 		2833429 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PSA09 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12639.1 [NCBI]
Genbank nucleotide accession
MZ089730.1 [NCBI]
CDS location
range 20771 -> 21310
strand +
CDS
ATGTTAGGGATTTTCACCAGCCTCCTAAGCTCGCGGTCTTTTTCGATTGTCGATCAGAATACAAACCAGCTAGTTGCTGCGGATTTGAGGATAAGCCGGGTTAACACCCGGTTTTCTTCTGTAGGGCAGCGCCACATGCTGGAAGACGGTACGACCAAGATGGATTCCAGAACGATCCACCCTATGGAAATCATCGTCGAAGTATTTTGCCCTTCAATTGATGTCGTCGATCAGATCAATCAATTGCTCCTGGATCGCGACACACTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGAATGATGTGTACCAGCGAAGCGCTCAATCAGACGCCAGAAATGATATCGGCAACTCCTGCGCGACTGACATTTTCCCAGGTGCTCGTTCAGAATCCCAAACCAATCATGTTCAGGAATGCTGGAGACTCTTCCATAATCGACCGAGGGTTGGCCCTGGCCGAAGACGTTGTGGACTCGGCCAGTGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e2adecd20b1ffd6d3434b9889322a1d5cd4a02e90310dd6779f84385d06f5c6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7196
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank