Protein

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Genbank accession
YP_010355576.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MAIVFPASPTLNDTFTAGFITYKCVQVNPNKWIGLGVTPADRLVEGSNSLEINASNNLVWTGGTTSLNNTSINDQLTVGSGSSANSDYGIIAYADSNSTSNKSSVYARNIGGGRNFTGDNSAGATTFEVYSSGSVVLTQSAASSINSLDTLNSGGGDNVVKVRTQANQGGDPYIKFDGGGSNFVVGEQYNGTTNNQLLMGVGETPTSVVGFGVDGNGKTWSGTHLDGNGQFSIRNNASSRHTSFELSGDNLSNYKMIRASGKYITRGTSERNFDIVNSGDTGTNVNILIEVTFMLNSAVTNHAGSVTARAGYHRSGGGNFTFWTNTPSVSMYNGSGYGAGSISWVGGGTNVKTLRYSTDSNTNYTNYVIKELIVTGYDLAGAVIL
Physico‐chemical
properties
protein length:385 AA
molecular weight: 40234,40930 Da
isoelectric point:5,56661
aromaticity:0,09091
hydropathy:-0,27325

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010355576.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,7364
Central domain 25 223 200 0,0900
C-terminal 224 385 161 0,9909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-223
C-terminal
224-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010355576.1 [NCBI]
Genbank nucleotide accession
NC_062735.1 [NCBI]
CDS location
range 173000 -> 174157
strand +
CDS
ATGGCAATTGTATTTCCAGCAAGTCCTACTTTAAATGATACATTCACTGCTGGGTTTATCACATACAAATGTGTTCAGGTAAATCCAAATAAGTGGATTGGACTGGGTGTTACTCCTGCTGATAGATTGGTTGAGGGTAGCAATAGTTTAGAGATTAATGCTAGTAATAATCTAGTTTGGACTGGCGGAACTACTAGTTTAAATAACACCAGCATTAATGATCAACTAACTGTTGGTAGTGGATCTTCTGCTAATTCTGACTATGGTATAATTGCTTATGCAGATTCAAATTCTACATCTAATAAATCTTCTGTATATGCTAGAAATATTGGTGGTGGTCGTAATTTTACTGGTGATAATTCTGCTGGTGCTACCACATTTGAAGTTTATTCATCTGGAAGTGTCGTACTTACTCAATCAGCTGCTAGTTCGATTAACTCATTAGATACACTTAACTCAGGTGGTGGTGATAACGTTGTCAAGGTAAGGACACAAGCTAATCAGGGTGGCGATCCATATATCAAGTTTGATGGTGGTGGTTCTAACTTTGTTGTTGGTGAGCAATATAATGGCACAACAAATAATCAATTACTTATGGGTGTTGGAGAAACTCCAACATCTGTTGTTGGTTTTGGTGTTGATGGTAATGGTAAAACTTGGTCTGGCACTCATCTTGATGGAAATGGTCAGTTTAGTATAAGAAACAATGCCAGTTCTAGACACACAAGTTTTGAATTGAGTGGTGATAATTTAAGTAACTATAAAATGATTCGTGCTTCTGGTAAGTATATCACTAGAGGAACGTCGGAAAGAAATTTTGATATTGTCAATTCTGGCGATACTGGAACTAATGTCAATATTCTGATTGAGGTTACATTCATGTTAAACTCAGCAGTGACAAACCACGCAGGTTCTGTTACTGCTAGAGCAGGATATCACAGATCTGGTGGTGGCAACTTTACTTTCTGGACAAATACTCCTAGTGTATCCATGTATAATGGTTCTGGATATGGTGCCGGTTCGATATCTTGGGTTGGTGGGGGCACAAATGTAAAAACTCTCAGGTATTCTACTGACTCCAATACAAATTATACAAATTATGTGATTAAAGAACTGATTGTAACTGGATATGATTTAGCTGGCGCAGTAATCCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18f0268183b28278879a0493cd61920a60fff1086c7c6502c1692e4dcf1ea241
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank