Protein

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Genbank accession
XAI97945.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGTYEAGLGNAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSQVGQFTAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYIYNSGLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAHRGHNWFYVCNSNIRGYVGKKGTVPANVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDWYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPAYPGAGNYYRALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGAAWQVQGRRQHSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHADEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63809,34900 Da
isoelectric point:8,40160
aromaticity:0,11933
hydropathy:-0,21345

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
XAI97945.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI97945.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0455
Central domain 11 209 200 0,6692
C-terminal 210 595 385 0,8245
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage YJin-2024a
[NCBI] 		3140160 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI97945.1 [NCBI]
Genbank nucleotide accession
PP534475 [NCBI]
CDS location
range 8893 -> 10680
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCATTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGATGGCACTTATGAGGCTGGATTAGGAAATGCTGGAAATGGGTTTTTTGTATGTCAGATGCCCTCTGACATAATAAATATTAAATCCAATGACCCAGGTAGAGTTATACTAACTGCTATTGAGATTAATGGTACTCATAGGGCTTTTCTTAATGGTACTCAGTCTCAAGTTGGTCAATTTACTGCATTTTTTGAAGATCCGCCTATTGGTAGGGCAGGTGCAGAAGTAGGTCTTACGTCAGCTTTTGCATCAGGTAATAGTTTAGCACATGGCACCTATATTTATAACTCTGGTTTAGGCCATGAAGAATCAATTGCTAGGCAGGGTACAGGTGGTACCATATCTCAAGCCTCCGGGTTTAATTTATATAGGCCGGGAGGAGCATATGCTGGTGAGGCTATAGGTAGGGCATGGACTTTAGCAGGATTTCCAGCAGGAGCATCTACAGTACCTATAGACGGTGGTAATGCTGACTACTGGCATCCTAATTGGCAAGCTCCTATAGGGGCCGCCCATAGGGGGCATAATTGGTTCTATGTTTGTAACTCTAATATACGAGGTTACGTAGGTAAAAAGGGCACAGTACCAGCTAATGTTAACTTATTATACCAATCTCCTACGTATCCTGATAAGGTTTATATATGTAAAGGTTCAACATCTAATCTAGCAGCACAGGCCGCTAAGAAAGTGTATGTGCAGGATTGGTATAACATAACTCCTACTAAGGTTATTTGGTATGTACTTAATCTAAGGTACTCTAATGGTAATATGGGTGTATCTGGTAATCCATTTACTGGGTCAGATATACTTATAACTCCATCTAATTTTACTATAAAAGGGGTTAGTTTACCAAATACTGGATATAAGTTTATCAACCAAAATGCTTTTGGTAACTTAGGCTATAGGCCAGATATGGAGTACATTGGAAATAACGCAGCGTACACTGGAGCCTTCGGGGATACCACTGCAAGATGTGAAATTGTAGGATCTAGTAATGGATCTTTATGGTCTCCTGTAGATTATGGAGGAGCCAAGTCTCAAATCAGTATTTACAAATTCGGAGCAGGTAAGCAATGGTACGTAAACTCAAGTAATAACACTATCGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCTTTAAGACTATTTCCTAATAATGTTGCTAGCACCTACGTTGGTGATGATATAACCCCCGCGTATCCTGGAGCAGGCAACTACTATAGAGCTTTGGCCACCATAGGATTAGGATTGCCTAACGCTAACGCAACGGTAATATTAACTACGGAAGTTATTATGGGTAATATTAATACGGCTGGAGGAGCCATACGCACATACGGTGGTGCTGCTTGGCAAGTACAAGGAAGAAGACAGCATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATACTTAGTCCCTTATCACTCCACTACTGCATATAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCATGCAGATGAGGCTGCAGCTATTTTCCTACCAAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7e56c0ee6286d5c88d881ed879b140e5c6f93d0f535aee0c2b9d974e17c6a58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2669
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50