Protein

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Genbank accession
YP_009616009.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTKPNFPLGLESQEQSIFQEGLLNNGVMEHGPDAVMTVPETIDASGIPSAIRYNATDDQFEGYYADGGWMAMGGGGSGRWVLLPHADTTTLQLGRAYLVDNSPGASTVVFPSPKRVGDSITLTDLKGKFSTYPLSVDGGGNAIYGSVEPMTISTDNVSATFTWTGDGRGWVITAGVGLGQGRVYSREIYSQILSAETVSITLSTQPSIVDVYVNGKRLKESLYTLNGYDVQFDPHLVEGDDVQIIQYIPIQLGNGGNGGGGGTVITWIYNGGAANGGETEITLDIVVDSVSEIYIRGSRQQIGLGFEFDPATSKITLADALEQGDDVVVVINGDPTVYNQIDRTPWEVARANNVSNAEVILSTDKQTALDDKTVLYDVATQTSWGIPEGLPTGVKITSVSPSGVLVYSPGTASVQMEKLGAAVLKADLATSTPLFSGAMLVKTIRGLTVQQELDRGRIVFPELFSIGLTNPTDDDLWDAMFSTLTSMSTGLSTELPYTIDLRGKEYTLTRSHKLDMNVNICNGTIWMSYGGQIILGEESTTGKTRRYLLKELKVRYTGTKYYPDALLKIARCFNSQIFCCDFWAGDSTAVDPDNSSVWQRARYGLWLGSKRAWGCGVFGGDFYGGDIPCRIGFTNDHTGLTVTGGATFHHGRVGNLLCCNPSGAFIGGINIEHSENGAWGLCVTSSTNGGSNPAHGVEIVGIYFYNNANGTTGTVYAPAGILIGYDAPGTMDFDVAGQEITSLNTAHTITVRNCNPISPKQLRAVKMRGLFGLKVMENKYTMADGELYGITIEGTAARSRVEDNRNQSSGLADEVEYTSTNKPTVGNKAGTFLPSLSASVSSGSLTYSTRGGDYSISNGMCLLSMWLTVGSITTQPDGDLTVSLPVSISSGRRAGCGVQAINISGTTSQTINSVGALDSDANATLKATGTVVINNNTLPVTAYILSGSTLVLRIGNQSLKGNMLMANTALMLSIAYPVDGAVYTGS
Physico‐chemical
properties
protein length:990 AA
molecular weight: 105061,74150 Da
isoelectric point:4,84083
aromaticity:0,07879
hydropathy:-0,08253

Domains

Domains [InterPro]
DC_1946
ATT
1–774
DC_1946
G3DSA:3.30.2020.50
ATT
343–427
G3DSA:3.30.2020.50 DC_1378
YP_009616009.1
1 990
Architecture
ATT
RBD
ATT 1-774 | RBD 775-981 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009616009.1
1 990
Domain Start End Length (AA) Confidence
N-terminal 1 476 476 0,9973
Central domain 477 834 359 0,9916
C-terminal 835 990 155 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-476
Central
477-834
C-terminal
835-990

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_Sru_IME250
[NCBI] 		1852640 Uroviricota > Caudoviricetes > Pantevenvirales > Taipeivirus > Taipeivirus IME250
Host Serratia rubidaea
[NCBI] 		61652 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009616009.1 [NCBI]
Genbank nucleotide accession
NC_042047 [NCBI]
CDS location
range 74686 -> 77658
strand +
CDS
ATGGCCAATAAACCTACGAAACCGAATTTCCCGCTGGGGCTTGAGTCCCAGGAACAATCAATTTTCCAAGAAGGACTGTTGAACAATGGAGTTATGGAACATGGCCCAGATGCGGTCATGACTGTTCCAGAGACTATTGATGCTTCAGGAATCCCTTCGGCTATTCGTTATAACGCGACTGATGACCAATTTGAAGGTTATTATGCCGATGGTGGTTGGATGGCCATGGGAGGCGGTGGAAGTGGCCGCTGGGTACTCCTTCCGCATGCCGATACGACTACTTTACAACTTGGTCGTGCCTATCTGGTTGACAACAGCCCCGGTGCCTCTACGGTGGTGTTCCCTTCCCCTAAACGGGTTGGTGATAGCATTACCCTGACCGACCTCAAAGGTAAATTTTCAACGTATCCGTTATCAGTTGACGGTGGCGGAAATGCCATTTATGGTTCAGTTGAACCGATGACAATATCCACTGATAACGTCAGTGCGACGTTCACATGGACGGGTGATGGTCGTGGTTGGGTTATTACTGCAGGCGTTGGCCTGGGGCAAGGCCGCGTGTACAGCCGAGAGATTTACAGCCAAATCCTTTCAGCTGAAACAGTTTCTATTACGTTGTCTACTCAACCGTCCATCGTTGATGTTTATGTCAACGGAAAGCGTTTAAAAGAATCCTTGTACACCCTGAATGGTTATGACGTCCAATTCGACCCTCATTTGGTTGAAGGGGATGACGTTCAAATTATCCAATACATCCCTATTCAATTGGGTAATGGCGGCAACGGTGGCGGCGGTGGAACTGTCATCACGTGGATTTATAATGGTGGTGCGGCTAACGGCGGAGAGACTGAGATTACTCTGGACATCGTTGTAGACTCAGTGTCTGAAATCTACATCCGGGGTTCCCGTCAGCAGATTGGCCTTGGATTCGAGTTTGATCCAGCAACAAGCAAAATTACTTTGGCTGATGCTCTGGAACAAGGTGATGATGTTGTCGTGGTCATCAACGGTGACCCAACAGTCTATAACCAGATTGACCGTACTCCTTGGGAAGTTGCCCGCGCAAATAATGTAAGCAATGCCGAAGTTATTCTCAGTACCGACAAGCAAACTGCGTTGGATGACAAAACAGTTCTTTACGATGTGGCAACACAGACTAGTTGGGGGATTCCCGAAGGGTTGCCGACTGGTGTTAAGATAACGAGCGTTAGTCCTTCTGGCGTTTTAGTTTATTCTCCTGGCACCGCAAGTGTACAGATGGAAAAATTAGGCGCTGCCGTTCTTAAAGCAGATTTAGCAACGAGCACCCCTTTGTTTTCAGGTGCTATGCTTGTTAAAACTATTCGTGGTTTAACTGTACAACAAGAATTAGATAGGGGACGTATTGTTTTCCCCGAATTATTTTCTATAGGACTCACCAATCCTACCGATGACGATCTTTGGGATGCGATGTTTTCAACATTGACTTCTATGAGTACTGGATTGTCTACAGAATTACCGTACACCATAGATCTTCGGGGGAAAGAATATACTTTAACCCGTTCACATAAATTAGATATGAACGTGAACATTTGTAACGGTACTATATGGATGTCGTATGGTGGGCAAATAATTCTTGGAGAAGAATCAACAACAGGTAAAACTCGCCGTTATTTGTTAAAAGAATTGAAAGTTAGGTATACTGGCACAAAATATTATCCGGACGCGTTGTTAAAAATAGCACGTTGTTTCAACTCGCAAATATTTTGCTGTGATTTTTGGGCTGGTGATAGCACTGCTGTTGACCCTGATAACAGTAGTGTTTGGCAACGCGCTCGATATGGTTTATGGCTGGGTTCTAAACGTGCTTGGGGTTGTGGGGTTTTTGGTGGTGATTTCTATGGTGGTGATATTCCTTGTCGTATCGGGTTTACGAATGACCACACAGGTTTGACCGTGACGGGTGGCGCCACATTCCATCATGGCCGCGTCGGTAATTTATTGTGCTGTAACCCTTCTGGTGCATTCATAGGCGGCATCAATATAGAGCATTCAGAGAATGGAGCTTGGGGATTATGTGTGACCTCCAGCACTAATGGAGGCTCAAATCCAGCACATGGTGTAGAAATCGTGGGTATTTATTTTTACAACAATGCCAACGGGACTACAGGAACTGTGTATGCGCCAGCGGGTATTTTAATTGGTTATGATGCCCCAGGTACTATGGATTTTGACGTTGCAGGGCAAGAAATAACCAGTTTGAACACAGCACACACCATAACTGTCAGGAACTGTAACCCAATATCACCAAAACAATTGCGAGCAGTTAAAATGCGTGGATTGTTCGGGTTAAAAGTTATGGAAAACAAATATACTATGGCTGACGGAGAATTATATGGTATCACTATAGAAGGAACCGCAGCCCGGTCTAGGGTTGAAGATAACAGGAACCAATCTTCTGGTTTGGCGGATGAAGTAGAATATACTTCTACCAATAAGCCAACTGTTGGTAATAAGGCCGGGACATTTTTACCATCTTTGAGTGCATCTGTATCTTCTGGTAGTTTGACATATTCAACCAGAGGCGGAGATTATTCTATATCTAATGGGATGTGTTTGTTATCAATGTGGTTGACTGTTGGTTCTATAACGACGCAACCTGATGGGGATCTTACTGTTAGTTTACCTGTGAGTATATCTTCAGGCAGGAGAGCAGGTTGTGGTGTCCAAGCAATTAATATCAGCGGAACGACTTCCCAAACTATCAATAGCGTGGGCGCACTTGATAGTGATGCTAATGCGACGTTGAAGGCAACCGGAACTGTTGTTATCAACAACAATACATTACCAGTTACGGCTTATATTTTGAGTGGCTCCACGTTAGTGTTAAGGATCGGCAACCAATCATTGAAAGGTAATATGCTGATGGCTAACACTGCTTTAATGCTTTCTATCGCGTATCCGGTAGATGGCGCTGTATACACTGGTTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c9ee9b8ce058b9c6b2f17ecc04c586638fbc17b853b960b4e2528e5b63a9702
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50