Protein

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Genbank accession
QIG66099.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVAITIPPGVYNAPTPASKSAQWRETNLVRWIEDKLTPVGGWSQLVYDAPATRIRKIHRWIDTLGKEWTAYLCEGHLYVDIEGVLTDVSPVDPIVPPYDNLFAGGYGDFQYSLDEYGTPRPDKERDYVIAPCFTIDNWGEDLIVMTSVDGRLLRWKPSTPTAKAVEVPNAPKGRTFVVTPERFVIVFGADSTPQRFRWCDQENIENWNLADVASKAGEFYVEPASPIVSARRTRGGTIFHTTLGPYFITYAGMPYVYSYTALDGGSTPISEGAIIDTPRGAIWLATGGFWLYNGSSVAPIPCPVWNWVREDINVTLSRYYAVAVHLEQTGEVWFFFVSREGKFNDKFVSYSYRDGWWSMGKLCRACGLSSTYTNSPIMSDGFKIFRHDYGTQYPDAPEMPWAETFAINLGGGAGVSTVTQMVPDIGNDVGSVDFVLYSSLQRSSMNSPAPEIKSQPRPVRPDGYVDFRQTGRDHRLRIQSRDNGVPNWTFGNCELTIVGRGTR
Physico‐chemical
properties
protein length:503 AA
molecular weight: 56305,74670 Da
isoelectric point:5,44281
aromaticity:0,12922
hydropathy:-0,29404

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG66099.1
1 503
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,6582
Central domain 365 492 129 0,1070
C-terminal 493 503 10 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-492
C-terminal
493-503

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspP_OH
[NCBI] 		2712957 Uroviricota > Caudoviricetes > Wolominvirus >
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66099.1 [NCBI]
Genbank nucleotide accession
MT028492 [NCBI]
CDS location
range 26009 -> 27520
strand -
CDS
ATGGTAGCGATCACCATCCCACCGGGGGTGTACAACGCCCCAACCCCAGCTTCCAAGTCCGCCCAGTGGCGGGAAACCAATTTGGTGCGCTGGATTGAAGATAAGCTTACCCCGGTGGGTGGGTGGTCGCAACTTGTTTATGACGCCCCTGCTACACGCATCCGCAAGATACACCGGTGGATCGATACCTTAGGTAAGGAATGGACTGCGTATCTGTGTGAGGGTCACCTTTATGTGGATATTGAGGGTGTTCTGACGGACGTTTCGCCGGTAGACCCTATTGTGCCGCCATATGACAACTTGTTTGCGGGCGGTTACGGTGATTTTCAGTACAGTCTTGATGAATATGGAACCCCGCGCCCCGATAAGGAGCGTGATTACGTAATTGCACCATGCTTCACGATCGACAACTGGGGCGAAGACCTTATCGTGATGACTAGTGTCGATGGCCGCTTGTTGCGCTGGAAGCCCTCAACACCTACGGCGAAAGCAGTTGAAGTACCAAATGCACCTAAAGGCCGCACTTTCGTAGTTACCCCGGAACGGTTCGTAATTGTTTTTGGGGCGGACAGTACCCCGCAGCGGTTCCGTTGGTGTGACCAAGAAAACATCGAAAATTGGAACTTGGCTGATGTTGCATCGAAAGCTGGTGAATTTTATGTCGAACCCGCTTCACCGATCGTTTCTGCAAGGCGCACTCGCGGCGGTACTATATTTCACACTACTCTTGGTCCTTATTTTATTACCTATGCTGGAATGCCTTATGTGTACTCCTACACCGCACTAGATGGGGGTAGCACCCCGATATCCGAAGGTGCCATTATTGACACTCCTCGTGGCGCTATTTGGCTTGCAACTGGTGGGTTTTGGCTTTACAACGGCTCGTCGGTGGCCCCGATCCCTTGCCCTGTGTGGAACTGGGTGCGCGAAGATATAAATGTCACCTTATCCCGGTATTACGCGGTTGCGGTGCACTTGGAGCAGACTGGCGAAGTTTGGTTTTTCTTCGTATCCCGCGAGGGTAAGTTTAACGACAAGTTTGTGTCTTACAGCTACCGTGATGGTTGGTGGTCGATGGGCAAGCTTTGCCGCGCATGTGGGCTTTCTTCAACCTACACCAACTCCCCGATTATGTCGGATGGTTTTAAGATTTTCCGTCACGACTACGGAACCCAGTATCCAGATGCGCCTGAAATGCCGTGGGCGGAGACTTTTGCTATTAACCTAGGCGGCGGTGCGGGTGTTTCAACCGTCACCCAAATGGTTCCAGACATCGGTAATGATGTCGGCAGCGTGGACTTCGTCCTTTACTCCTCTCTGCAGAGGTCTTCGATGAATTCCCCGGCCCCGGAAATTAAATCACAACCCCGCCCAGTTCGCCCTGACGGGTATGTTGACTTTCGTCAGACAGGCCGCGACCACCGTCTTCGCATCCAATCGCGAGATAATGGCGTGCCTAATTGGACTTTTGGTAACTGTGAACTAACCATCGTTGGAAGGGGGACCCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b76bc3607746e51bfbd744943709d7e9453606bd309b8553a5bf498895757d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8855
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank