Protein

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Genbank accession
YP_003358914.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MDQRLSYIPNVSPMATWDFTARQLPNTSMFFRSTSAYGLMKGRLDNTSYGGGVWPVNGARFSSNPWTGENVGIMLECASTNLVPYSSDSNGWTFYGCNRIAPANSVFDGIYRHGAVIPSPGNQNEGGPICVMTWGFTMAAGSACTVSFIVERDTVASSGGPINWVLLQLRNVLPGGNSANVRFDMRNGNWANWGGAPDSVVVQPLYVVSEGKNVWRVSMTFNSVIGGTMNPAVYPMMDDGTLTGSLANRSFCLAHVQAEALRHPTSPILTTSTSGAVTRAADQLQLFYSHYHGNGLSAVIEYASRFGYDGPLFSAMNENGSPYNQVARSGNAISLNQSGTVTTNELNGVIPQGAGFTLGVNMGVNPAVAINGSSVGPKAGTSGGSTRWGAQINYFSPAGAMDPFGVVTVGSQVIKSVRVYQGEFTTAQLEALTK
Physico‐chemical
properties
protein length:434 AA
molecular weight: 45995,04600 Da
isoelectric point:6,95103
aromaticity:0,09908
hydropathy:-0,08433

Domains

Domains [InterPro]
DC_1416
STR
10–434
DC_1416
NF048003
Unmapped
75–281
NF048003
YP_003358914.1
1 434
Architecture
STR
STR 10-434
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_003358914.1
1 434
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3125
Central domain 11 209 200 0,0011
C-terminal 210 434 224 0,9634
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-434

Taxonomy

  Name Taxonomy ID Lineage
Phage Delftia phage PhiW-14
[NCBI] 		665032 Uroviricota > Caudoviricetes > Ionavirus >
Host Delftia acidovorans
[NCBI] 		80866 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003358914.1 [NCBI]
Genbank nucleotide accession
NC_013697 [NCBI]
CDS location
range 54725 -> 56029
strand -
CDS
ATGGACCAACGACTTAGCTATATCCCCAATGTCTCCCCAATGGCGACTTGGGATTTCACCGCCCGCCAGCTGCCCAACACTAGCATGTTCTTCCGGTCCACTTCGGCTTATGGGCTGATGAAGGGCAGGCTTGACAACACCTCCTATGGGGGTGGCGTTTGGCCAGTGAACGGTGCCCGGTTCTCTTCCAACCCTTGGACCGGCGAGAATGTTGGTATTATGCTGGAGTGCGCATCTACTAATCTGGTGCCCTATTCCAGTGACTCCAATGGTTGGACATTCTACGGGTGTAATCGAATCGCACCGGCGAACTCTGTATTCGACGGCATTTACCGTCATGGCGCTGTGATTCCCTCCCCCGGTAACCAGAACGAAGGAGGGCCCATATGCGTAATGACCTGGGGGTTTACGATGGCTGCCGGCTCCGCCTGTACGGTGAGTTTCATTGTTGAGCGGGACACCGTGGCCTCTTCCGGTGGTCCCATCAATTGGGTATTGCTGCAGTTGCGTAATGTTCTGCCTGGTGGTAATTCCGCCAACGTCAGATTCGATATGCGCAACGGCAACTGGGCCAATTGGGGTGGCGCTCCTGATTCCGTTGTTGTGCAACCTCTGTACGTTGTGTCCGAAGGCAAGAACGTTTGGCGGGTGTCAATGACTTTCAACTCCGTCATCGGTGGCACCATGAATCCGGCGGTGTATCCGATGATGGATGATGGGACCTTGACTGGTTCTCTGGCCAACCGTTCCTTCTGCCTGGCTCATGTGCAGGCAGAAGCGTTGCGCCATCCCACCAGCCCGATTCTCACAACTTCCACCAGCGGAGCGGTCACGAGAGCGGCTGACCAACTGCAGTTGTTCTACTCCCACTACCATGGCAACGGATTGTCTGCGGTGATCGAATACGCCAGCCGATTTGGGTACGACGGGCCTCTGTTCTCGGCAATGAACGAGAATGGTTCCCCATACAACCAGGTTGCTCGCTCCGGCAACGCCATATCCTTGAACCAGTCCGGCACGGTCACCACCAATGAACTCAATGGTGTGATACCTCAAGGTGCTGGGTTCACTTTGGGCGTCAATATGGGCGTCAATCCGGCGGTTGCGATCAACGGTTCTTCTGTCGGACCCAAGGCCGGTACTTCAGGGGGTAGCACCAGATGGGGCGCCCAGATCAACTACTTCAGCCCTGCCGGGGCGATGGATCCTTTTGGTGTGGTGACGGTAGGTTCTCAGGTCATCAAGTCTGTTCGTGTGTATCAGGGCGAATTCACCACAGCCCAATTGGAGGCCCTCACAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3bbebaac01b7b2622a8ff4e788a616a2a18b5ff9b5c5e4b9d4d7c8319beb17a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50