Protein

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Genbank accession
WVO01184.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MIPFSRLLTYANTAPDKKYGMLMRAKDGFKDVWNPGRVITLNSTPSIDSTIVLPEQVKSFRFTSGFISLAVDQMQDLNVSKQEGDYTIEFYMYAVGRNTNNWYISNGTGVTGGVKIYTSNLYLQGRTKGTSLISSNIPLNVWTHVALVQSGTDVRLYISGSLKMILNGDRWGVYNTPLRIGGYETSANAYYDQIRISNSALYTESSITPPTYPFE
Physico‐chemical
properties
protein length:215 AA
molecular weight: 24024,90650 Da
isoelectric point:8,95938
aromaticity:0,12093
hydropathy:-0,23628

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
19–208
G3DSA:2.60.120.200
DC_2085
STR
20–206
DC_2085
IPR013320
STR
36–203
IPR013320
PF13385
LEC
81–201
PF13385
WVO01184.1
1 215
Architecture
STR
STR 19-208 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01184.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9555
Central domain 14 204 192 0,4482
C-terminal 205 215 10 0,2040
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01184.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 43814 -> 44461
strand -
CDS
ATGATACCATTTTCAAGATTATTAACATATGCTAATACAGCACCAGATAAAAAATATGGTATGCTCATGAGAGCTAAAGATGGATTCAAAGATGTTTGGAATCCGGGAAGGGTTATTACATTAAACAGTACTCCTTCTATAGACAGTACTATAGTATTACCCGAACAAGTGAAATCATTTAGATTCACTTCTGGTTTTATCAGTTTAGCTGTGGATCAAATGCAAGATCTTAACGTATCTAAACAAGAAGGTGATTATACTATTGAATTTTACATGTATGCTGTTGGTAGAAATACCAATAACTGGTATATCAGTAATGGTACTGGTGTTACTGGTGGTGTAAAAATCTATACAAGTAATTTGTACTTACAGGGTAGAACGAAAGGTACTAGCCTAATTTCAAGTAATATACCACTTAATGTATGGACACATGTAGCATTAGTACAGAGCGGAACCGATGTTCGTTTATATATCAGTGGTTCTTTGAAAATGATTCTTAATGGCGATCGATGGGGTGTTTATAACACACCATTACGAATTGGTGGGTATGAAACTTCTGCTAATGCTTACTATGACCAAATCAGAATAAGCAATTCTGCGTTGTATACAGAATCATCCATAACTCCACCAACATATCCATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a19c42539e97f4e89eaae7825cf379e5573378bf5c114591c62d9630536202bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank