Protein

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Genbank accession
YP_010766238.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPNISKPSGLNNIWAEGGTKIDPGTSKYNIGWVVQLPPYEYQNYIDNRQDRALAHINQHGIPEWDSTTEYQGNLSYTQASNGMIYKCTQTNTNKDPASTLNNDYWVIAFETFGSVAALQATVTAHITNYQTLSGIGNVAAARANLSVYSRVESDTRFAGLNGNSSQVFSVGVATQPEHAVRLGQVSSLLTQATESNLGVVRLATSGLTEQGTDDLTAITPLKANNVFLKKTGNLAGLSNPATARVNLGLGSAAVQPLTAFLQPSNNLSDVSNAGTARANLGITSTATQPEAYFLRSGQNLADLGNVTLARSNLGLGTSATRNIGTLAGSVAAGDDSRIVLATPNTRTVSAGPGMVGGGNLASNIALALGLPSTLSGVSTNTVTETSHSHAIDVNNLFTDKLLADNGYINLGGLTIQWGNIPATTSNSVYIPVPFPKAFGSKPFICGVLGSVGIIGVNSDNGAVAWNITRTGFTAYVAWDYGTAPFPLTWIAIGV
Physico‐chemical
properties
protein length:494 AA
molecular weight: 51558,87120 Da
isoelectric point:6,07230
aromaticity:0,07287
hydropathy:-0,04555

Domains

Domains [InterPro]
DC_2128
STR
1–251
DC_2128 DC_1977 G3DSA:2.60.40.3940
DC_1977
STR
287–365
DC_1977
YP_010766238.1
1 494
Architecture
STR
STR
RBD
STR 1-251 | STR 254-365 | RBD 400-493 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PPSC2
[NCBI] 		2041350 Uroviricota > Caudoviricetes > Vandenendeviridae > Shenlongvirus > Shenlongvirus PPSC2
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010766238.1 [NCBI]
Genbank nucleotide accession
NC_073678.1 [NCBI]
CDS location
range 21883 -> 23367
strand +
CDS
ATGCCTAACATTTCTAAACCTTCCGGCCTTAACAACATTTGGGCGGAAGGTGGCACAAAGATTGATCCGGGTACAAGTAAGTACAACATCGGGTGGGTTGTTCAACTCCCACCTTATGAGTACCAAAACTACATCGATAATAGACAAGATCGAGCCCTAGCCCACATTAACCAGCATGGAATCCCTGAATGGGATTCCACAACTGAGTACCAAGGAAACTTGAGCTACACTCAAGCCTCTAATGGTATGATCTATAAATGCACACAAACAAACACAAATAAAGACCCTGCAAGTACACTTAACAATGACTACTGGGTTATTGCGTTTGAGACCTTCGGTAGCGTGGCAGCTTTGCAGGCAACTGTAACAGCCCACATCACAAACTATCAGACACTCTCTGGGATCGGTAACGTCGCTGCTGCAAGGGCGAACCTGTCTGTGTACTCTAGAGTTGAAAGTGATACAAGGTTTGCAGGACTGAACGGAAACTCTTCTCAAGTGTTCTCTGTTGGAGTTGCAACCCAGCCAGAGCATGCAGTTCGTCTTGGTCAAGTTTCCAGCCTGCTAACTCAGGCAACAGAGTCGAATCTTGGGGTTGTGCGTCTCGCAACCTCTGGTTTGACTGAACAAGGTACAGATGACCTGACAGCAATCACACCTCTGAAGGCAAACAATGTCTTCCTCAAGAAGACTGGCAACCTTGCAGGACTCTCTAACCCAGCTACGGCACGAGTTAACCTTGGCCTAGGCAGTGCAGCTGTACAACCTCTTACGGCCTTCCTGCAGCCTTCCAACAACCTTAGCGACGTATCTAACGCTGGGACTGCCAGAGCCAACCTAGGAATCACCTCTACGGCTACACAGCCAGAGGCATACTTCCTGAGGTCCGGCCAAAACCTAGCTGACCTTGGCAACGTGACTTTGGCTCGCTCCAATCTTGGACTGGGGACAAGTGCAACACGTAACATCGGAACCCTAGCAGGCTCCGTTGCTGCTGGAGACGACAGCCGTATTGTGTTGGCAACCCCAAACACAAGAACAGTTTCGGCTGGTCCGGGTATGGTTGGTGGTGGTAACCTTGCATCGAACATTGCATTGGCTTTGGGGCTTCCTTCTACACTAAGTGGCGTAAGCACTAATACAGTAACTGAAACATCCCACTCACACGCGATTGATGTTAACAACCTGTTCACTGATAAATTGCTTGCTGACAATGGATATATCAACCTAGGAGGACTTACCATCCAATGGGGTAATATTCCAGCAACAACAAGTAACTCTGTGTACATTCCAGTTCCGTTCCCTAAGGCGTTTGGCTCTAAACCATTCATCTGTGGTGTTCTTGGCTCTGTTGGTATCATTGGGGTGAACTCCGATAACGGTGCTGTGGCATGGAACATTACACGAACTGGGTTTACAGCTTATGTTGCTTGGGACTATGGTACAGCTCCATTCCCATTGACTTGGATTGCTATTGGAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
361469a18865e04ad6dfe97337d99687e67b1a2ff544a17bf3abccb513538337
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7284
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50