Protein

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Genbank accession
YP_010080800.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIFKAYCWNPNTGRDFTIKKPNWNIVQRCSLKSIETIQFLPQHIYLLDGTTGSETSKRWQRKKCPDDWNRPFSYGSIVTKPQGENKISGIAFCTDYERKQYPSLYPNFITPNLTQGQKYGLSGTLYNPGINVLEVRLKLLYGTKNELVGTYQVQPNQYLDVKEVYTLPSTETVEKFGIAFEVAQTSDFVQFEVYLPKIEQGGEVTPFVEDRDEFYSHQKTNTDDGTPPFTGTYEGTPPQSTDYKVYTWTGSKTDKELFYLEERGICKQEAVWCYSRPLNQRVLIGIDSDTYDTEAGRTLKFHVLNGNNGIFDLTGNIIYPEQFTDKRQTFDSDTKAWIDNQEPLYVTDANTAIDCTFGEMASNIIEGYYYQQADKRYRVDELLRSAMVNTGYNMGSYWADWNFDSYANEMRASYNIENCRVSEKTNYSSMNEWTGSVAFPTGVVLAPYKPKLNETDTRKPKGVSSATSIWATGVLRTDRSTEDWFREYENSITRPVPTQILFANYNTKKAWLFQQQTNGTWSKSGEFTIPGSATSFARAWGIIPKNGELKGNVIMTDKNYVDFPANVRPITLGVEELFPVIKYNEVKFNPQMYATAYNTKLFWWGQKANVSNLTYGECGVRSVNFMTGLCTIERIYK
Physico‐chemical
properties
protein length:638 AA
molecular weight: 73193,16050 Da
isoelectric point:5,67574
aromaticity:0,13793
hydropathy:-0,59655

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 62606
[NCBI] 		2024340 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010080800.1 [NCBI]
Genbank nucleotide accession
NC_054998.1 [NCBI]
CDS location
range 17597 -> 19513
strand +
CDS
ATGACTATTTTTAAAGCGTATTGCTGGAATCCTAACACAGGTAGAGATTTCACAATTAAAAAACCTAATTGGAACATTGTACAACGTTGTTCTTTGAAGAGTATCGAAACAATTCAATTTTTGCCACAACACATCTATTTGTTAGACGGAACGACAGGTTCAGAAACAAGCAAGCGTTGGCAAAGAAAAAAATGTCCTGACGACTGGAATAGACCTTTTAGCTATGGTTCTATTGTTACTAAACCACAAGGGGAGAATAAAATAAGCGGTATTGCTTTTTGTACAGATTATGAAAGAAAACAATATCCTAGCTTATACCCTAACTTTATAACACCGAACCTCACACAAGGGCAAAAATATGGCTTGTCAGGAACTTTATACAATCCAGGTATAAATGTACTAGAGGTAAGATTAAAACTTCTATACGGCACTAAAAATGAGCTTGTAGGAACATACCAAGTTCAACCTAATCAATACTTAGATGTAAAAGAAGTATACACGCTACCTAGTACGGAAACGGTTGAAAAGTTTGGTATAGCCTTTGAGGTTGCTCAAACAAGCGATTTTGTACAATTTGAAGTGTATTTGCCTAAGATTGAACAAGGTGGAGAGGTCACTCCGTTTGTTGAGGATAGAGATGAATTTTATAGCCATCAAAAAACTAACACAGACGACGGAACGCCGCCATTTACAGGGACTTATGAGGGTACACCACCACAAAGTACCGATTATAAAGTTTATACTTGGACAGGTTCTAAAACTGATAAAGAGCTTTTTTACTTAGAAGAAAGAGGAATTTGCAAACAAGAAGCCGTTTGGTGCTATAGTCGCCCCCTTAATCAACGTGTATTGATTGGAATTGATTCAGACACTTATGACACCGAAGCAGGTAGAACACTCAAATTTCATGTTTTGAACGGAAATAATGGCATATTTGATTTGACTGGTAACATCATTTATCCTGAACAGTTCACAGACAAGCGACAAACTTTTGATAGCGACACAAAGGCTTGGATAGATAACCAAGAACCGTTATATGTTACAGACGCAAATACAGCAATAGATTGTACTTTCGGAGAAATGGCAAGTAACATCATAGAGGGTTATTATTACCAACAAGCAGATAAACGTTATAGAGTGGACGAGTTACTTCGTTCAGCAATGGTTAACACAGGTTACAACATGGGTTCTTATTGGGCTGATTGGAACTTTGATAGCTACGCGAATGAAATGCGTGCAAGTTATAACATTGAGAATTGTAGGGTTAGTGAAAAAACAAATTATAGTTCTATGAATGAATGGACTGGAAGCGTGGCTTTTCCTACTGGTGTTGTTTTAGCACCTTATAAACCAAAACTAAATGAAACGGACACTAGAAAACCCAAAGGGGTTTCTAGTGCAACAAGTATTTGGGCTACTGGTGTATTAAGAACAGATCGAAGTACAGAAGATTGGTTTAGAGAATACGAAAATTCAATAACTAGACCAGTACCAACGCAAATTCTTTTTGCTAACTATAACACTAAAAAAGCATGGTTATTTCAACAACAAACCAACGGAACGTGGAGCAAAAGTGGAGAATTCACGATACCAGGAAGCGCCACGTCATTCGCTAGAGCTTGGGGTATTATACCAAAAAATGGAGAATTGAAAGGTAATGTTATCATGACAGATAAGAATTACGTTGATTTTCCTGCAAACGTTAGACCGATAACGCTAGGAGTGGAAGAACTGTTCCCAGTTATCAAGTATAACGAAGTTAAGTTTAACCCTCAAATGTACGCAACTGCTTACAATACCAAGCTATTTTGGTGGGGACAAAAGGCGAACGTAAGCAACTTAACTTATGGGGAGTGTGGAGTTCGTTCGGTTAATTTTATGACTGGTTTATGTACAATAGAAAGGATATATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9be64ede5178625632492a4381550bc5bd5e20349142e9b1c306e8f28ad70a2a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4983
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative genome analysis of members of the virulent lactococcal c2 group phages Oliveira,J. 2024 — GenBank